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ZFP36
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:78.8 nTPM
HPA:78.8 nTPM
GTEx:151.7 nTPM
FANTOM5:1159.3 Scaled Tags Per Million
Pig:151.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 78.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 51.3
2048 Male, age 55, midline 57.0
1981 Female, age 72, midline 56.7
2194 Female, age 79, both hemispheres 54.4
2816 Male, age 47, midline 47.5
2565 Male, age 75, midline 40.9
Cervical spinal cord, dorsal horn
nTPM: 55.2
2721 Male, age 90, both hemispheres 71.9
1877 Male, age 55, unknown 61.8
2069 Male, age 47, both hemispheres 57.5
2173 Female, age 72, unknown 54.3
2296 Male, age 66, both hemispheres 44.7
2297 Male, age 75, both hemispheres 41.2
Cervical spinal cord, ventral horn
nTPM: 78.8
2098 Female, age 72, unknown 175.7
2809 Male, age 90, both hemispheres 82.9
2068 Male, age 55, unknown 59.1
2295 Male, age 66, both hemispheres 58.2
2820 Female, age 79, both hemispheres 51.1
2480 Male, age 75, both hemispheres 45.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 151.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 151.7
Samples: 159

Max nTPM: 985.8
Min nTPM: 17.2
Std nTPM: 123.8
Median nTPM: 120.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 985.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 685.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 641.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 494.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 474.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 464.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 419.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 383.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 336.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 296.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 295.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 288.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 286.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 285.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 281.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 279.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 260.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 259.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 235.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 234.5
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 225.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 224.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 223.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 216.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 214.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 212.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 207.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 202.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 201.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 199.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 198.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 198.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 196.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 195.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 195.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 194.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 193.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 193.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 192.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 192.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 188.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 185.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 184.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 183.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 181.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 180.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 177.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 177.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 173.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 172.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 170.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 167.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 164.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 164.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 161.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 161.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 154.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 153.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 152.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 150.8
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 148.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 147.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 146.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 143.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 138.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 136.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 133.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 133.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 131.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 130.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 129.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 129.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 129.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 129.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 128.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 127.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 124.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 121.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 121.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 120.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 120.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 119.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 118.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 118.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 118.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 117.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 117.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 116.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 113.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 112.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 110.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 110.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 107.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 106.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 105.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 104.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 104.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 102.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 100.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 100.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 99.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 99.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 98.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 96.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 96.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 95.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 94.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 91.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 89.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 88.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 85.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 85.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 84.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 82.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 82.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 82.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 81.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 79.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 79.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 77.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 77.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 76.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 75.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 71.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 70.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 70.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 70.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 69.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 66.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 65.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 64.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 63.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 63.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 62.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 61.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 61.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 60.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 59.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 59.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 57.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 57.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 56.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 55.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 54.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 51.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 49.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 48.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 47.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 46.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 45.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 42.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 41.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 36.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 34.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 29.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 28.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 21.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 18.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 17.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1159.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1159.3
FF:10181-103D1 60 years, female 1762.0
FF:10159-103A6 76 years, female 556.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 151.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 151.4
Samples: 4

Max nTPM: 305.8
Min nTPM: 37.6
Sample A Female 37.6
Sample B Female 159.5
Sample C Male 305.8
Sample D Male 102.8
Ventral spinal cord
nTPM: 90.9
Samples: 4

Max nTPM: 150.6
Min nTPM: 46.5
Sample A Female 46.5
Sample B Female 79.3
Sample C Male 150.6
Sample D Male 87.0

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