We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
BAIAP2L2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • BAIAP2L2
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:81.6 nTPM
HPA:81.6 nTPM
GTEx:66.3 nTPM
FANTOM5:252.1 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003043
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 81.6
overview
Male, age 65
Small intestine sample 232
nTPM: 94.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 92
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 60.2
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 79.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 66.3
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 66.3
Samples: 187

Max nTPM: 264.3
Min nTPM: 0.8
Std nTPM: 66.2
Median nTPM: 46.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 264.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 259.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 248.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 225.9
GTEX-ZTSS-0926-SM-59865 40-49 years, male 214.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 213.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 213.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 204.4
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 199.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 187.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 187.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 187.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 180.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 175.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 173.9
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 173.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 173.2
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 172.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 171.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 169.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 167.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 159.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 156.4
GTEX-14PN3-2026-SM-68729 60-69 years, female 150.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 147.7
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 144.8
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 143.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 140.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 139.4
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 138.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 137.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 135.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 134.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 133.1
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 132.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 130.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 130.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 128.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 128.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 128.3
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 127.3
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 127.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 127.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 124.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 120.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 116.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 116.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 113.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 112.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 108.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 108.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 105.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 101.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 101.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 95.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 94.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 93.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 93.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 92.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 92.4
GTEX-14PKU-1626-SM-6871C 40-49 years, female 92.0
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 90.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 88.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 87.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 85.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 83.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 83.3
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 80.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 79.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 78.3
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 77.3
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 75.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 75.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 73.9
GTEX-14PK6-1626-SM-6871I 70-79 years, female 73.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 69.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 68.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 68.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 68.1
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 67.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 65.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 62.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 61.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 60.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 57.7
GTEX-1C475-1426-SM-793CH 40-49 years, female 57.2
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 54.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 54.2
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 53.0
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 52.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 51.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 50.0
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 47.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 46.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 45.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 42.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 40.7
GTEX-13O61-1326-SM-5KM31 60-69 years, male 40.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 39.3
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 37.0
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 36.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 34.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 29.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 28.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 27.2
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 26.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 26.5
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 25.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 25.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 25.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 24.5
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 22.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 22.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 21.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 20.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 19.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 18.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 18.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 17.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 17.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 15.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 15.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 14.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 14.0
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 12.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 11.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 10.7
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 10.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 10.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 10.2
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 9.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 8.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 8.7
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 8.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 8.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 8.0
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 7.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 7.3
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 7.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 7.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 6.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 6.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 5.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 5.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 5.3
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 5.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 5.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 4.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 4.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 4.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 4.3
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 4.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 4.3
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 4.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 3.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 3.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 3.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 3.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 3.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 3.0
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3.0
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2.9
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2.8
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 2.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2.7
GTEX-1192X-2526-SM-59868 50-59 years, male 2.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2.6
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 2.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 2.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 2.2
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 2.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2.2
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 2.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 2.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1.8
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1.6
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 0.8
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 0.8
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 252.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 252.1
FF:10024-101D6 15,40,85 years, mixed 252.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.