PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.5 nTPM
HPA:29.5 nTPM
FANTOM5:197.6 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:10.2 nTPM
Allen mouse:0.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 29.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 21.3
2188 Female, age 91, both hemispheres 22.8
2090 Male, age 80, both hemispheres 22.1
2301 Female, age 85, both hemispheres 21.8
1984 Male, age 76, both hemispheres 18.4
Area postrema
nTPM: 25.2
2799 Male, age 61, both hemispheres 30.2
2306 Male, age 80, both hemispheres 27.9
2054 Male, age 76, both hemispheres 17.5
Cuneate nuclei
nTPM: 25.3
2376 Male, age 61, both hemispheres 27.6
2381 Male, age 80, both hemispheres 25.2
2131 Male, age 76, both hemispheres 23.1
Dorsal cochlear nucleus
nTPM: 28.8
2802 Male, age 74, right hemisphere 37.6
2378 Male, age 80, both hemispheres 35.5
2370 Male, age 61, both hemispheres 25.5
2187 Female, age 91, both hemispheres 24.6
2058 Male, age 76, both hemispheres 20.9
Dorsal medullary reticular nucleus
nTPM: 22.7
2373 Male, age 61, both hemispheres 28.2
2040 Female, age 85, both hemispheres 21.3
2088 Male, age 76, both hemispheres 18.7
Dorsal motor vagal complex
nTPM: 23.4
2797 Male, age 61, both hemispheres 36.2
2844 Male, age 55, unknown 26.4
2185 Male, age 76, both hemispheres 26.0
2807 Female, age 85, both hemispheres 21.6
2813 Female, age 72, unknown 21.3
2133 Female, age 91, both hemispheres 20.0
2000 Male, age 74, unknown 17.8
2643 Male, age 74, both hemispheres 17.5
Dorsal tegmental nucleus
nTPM: 29.1
2358 Male, age 61, both hemispheres 45.0
2083 Male, age 80, both hemispheres 27.2
2326 Male, age 74, both hemispheres 23.4
1936 Male, age 76, left hemisphere 20.9
Dorsolateral tegmental area
nTPM: 23.2
2337 Male, age 61, both hemispheres 26.0
2654 Male, age 80, both hemispheres 25.5
2751 Female, age 85, both hemispheres 24.5
2141 Male, age 76, both hemispheres 23.4
2360 Male, age 74, both hemispheres 16.7
Gigantocellular reticular nuclei, medullary
nTPM: 25.9
2314 Male, age 61, both hemispheres 30.4
2310 Male, age 80, both hemispheres 30.2
1876 Female, age 85, both hemispheres 25.3
2022 Male, age 76, right hemisphere 25.1
2387 Female, age 91, both hemispheres 24.8
2462 Male, age 74, both hemispheres 19.3
Gigantocellular reticular nuclei, pars
nTPM: 27.4
2330 Male, age 80, both hemispheres 32.4
2336 Male, age 61, both hemispheres 32.2
2706 Male, age 80, both hemispheres 31.7
2084 Female, age 85, both hemispheres 21.4
2168 Male, age 76, both hemispheres 19.3
Inferior olive
nTPM: 29.2
2628 Female, age 91, both hemispheres 34.1
2178 Male, age 61, both hemispheres 31.7
2379 Male, age 80, both hemispheres 28.4
2085 Female, age 85, both hemispheres 27.4
2563 Male, age 74, both hemispheres 24.2
Kolliker-Fuse nucleus
nTPM: 23.2
2163 Male, age 80, both hemispheres 29.3
2793 Female, age 91, left hemisphere 25.4
2315 Male, age 76, right hemisphere 14.9
Lateral lemniscal nuclei
nTPM: 21.1
2453 Male, age 74, right hemisphere 26.0
2320 Female, age 91, left hemisphere 23.9
2169 Male, age 76, both hemispheres 21.6
2036 Male, age 80, both hemispheres 17.9
2746 Female, age 85, left hemisphere 16.2
Lateral medullary reticular nucleus
nTPM: 20.9
2374 Male, age 61, both hemispheres 31.4
2804 Female, age 91, both hemispheres 22.2
2190 Female, age 85, both hemispheres 22.1
2044 Male, age 76, both hemispheres 20.2
2852 Male, age 80, both hemispheres 16.7
2305 Male, age 74, both hemispheres 12.5
Lateral parabrachial nucleus
nTPM: 20.6
2790 Male, age 61, both hemispheres 24.5
2139 Female, age 85, right hemisphere 19.8
2013 Male, age 80, both hemispheres 19.4
2792 Male, age 76, both hemispheres 18.5
Lateral vestibular nucleus
nTPM: 25.4
2184 Male, age 76, both hemispheres 29.0
2311 Male, age 80, both hemispheres 21.7
Locus coeruleus
nTPM: 19.9
2720 Male, age 74, both hemispheres 23.9
2162 Male, age 80, both hemispheres 22.1
2123 Female, age 91, both hemispheres 20.3
1980 Male, age 76, both hemispheres 19.2
2014 Male, age 55, unknown 18.3
2317 Female, age 72, unknown 18.3
2788 Male, age 74, unknown 17.0
Medial olivary nucleus
nTPM: 18.0
2851 Male, age 80, both hemispheres 22.5
2138 Female, age 91, both hemispheres 18.2
1962 Male, age 76, both hemispheres 17.1
1943 Male, age 61, both hemispheres 14.2
Medial parabrachial nucleus
nTPM: 25.5
2156 Male, age 61, both hemispheres 33.6
2786 Male, age 76, both hemispheres 26.3
2854 Male, age 80, both hemispheres 24.8
2170 Female, age 91, both hemispheres 23.4
2463 Female, age 85, right hemisphere 19.5
Medial periolivary nuclei
nTPM: 18.9
2458 Female, age 91, both hemispheres 22.2
2171 Female, age 85, both hemispheres 21.6
2063 Male, age 76, both hemispheres 18.2
2081 Male, age 80, both hemispheres 17.9
2791 Male, age 74, right hemisphere 14.7
Medial vestibular nucleus
nTPM: 25.5
2624 Male, age 61, both hemispheres 39.2
2803 Female, age 91, both hemispheres 25.0
2093 Male, age 80, both hemispheres 24.7
2134 Male, age 76, both hemispheres 22.5
2801 Male, age 74, both hemispheres 21.3
2743 Female, age 85, both hemispheres 20.3
Motor facial nucleus
nTPM: 24.3
2795 Female, age 91, both hemispheres 33.7
2327 Male, age 80, both hemispheres 26.4
2126 Male, age 61, both hemispheres 26.0
2697 Female, age 85, both hemispheres 25.1
2365 Male, age 74, right hemisphere 18.2
2062 Male, age 76, both hemispheres 16.7
Motor hypoglossal nucleus
nTPM: 24.7
2461 Male, age 61, both hemispheres 38.0
2125 Female, age 91, both hemispheres 24.6
2182 Male, age 80, both hemispheres 22.5
2132 Female, age 85, both hemispheres 22.4
2277 Male, age 76, both hemispheres 15.9
Motor trigeminal nucleus
nTPM: 25.5
2335 Male, age 61, both hemispheres 32.3
2560 Male, age 74, both hemispheres 26.4
2321 Female, age 91, both hemispheres 26.0
2309 Male, age 76, both hemispheres 24.1
2079 Male, age 80, both hemispheres 18.7
Nuclei of the trapezoid body
nTPM: 19.8
2368 Female, age 91, both hemispheres 22.4
2166 Male, age 80, both hemispheres 20.9
2159 Male, age 61, both hemispheres 20.2
2735 Female, age 85, both hemispheres 18.2
1983 Male, age 76, both hemispheres 17.0
Nucleus ambiguus
nTPM: 19.9
2096 Female, age 85, both hemispheres 24.3
2071 Male, age 76, both hemispheres 15.5
Nucleus cuneatus
nTPM: 28.1
2562 Male, age 61, both hemispheres 38.9
2805 Female, age 91, both hemispheres 32.8
2564 Male, age 74, both hemispheres 26.7
2100 Male, age 76, both hemispheres 25.0
2808 Female, age 85, both hemispheres 24.5
2380 Male, age 80, both hemispheres 20.6
Nucleus gracilis
nTPM: 24.7
2299 Female, age 85, both hemispheres 29.5
2382 Male, age 80, both hemispheres 24.1
2627 Male, age 74, both hemispheres 20.6
Nucleus raphe magnus
nTPM: 21.6
2328 Male, age 80, both hemispheres 25.7
2172 Female, age 85, both hemispheres 22.5
2459 Female, age 91, both hemispheres 22.4
2455 Male, age 74, both hemispheres 21.9
2160 Male, age 61, both hemispheres 19.1
2051 Male, age 76, both hemispheres 18.2
Nucleus raphe obscurus
nTPM: 21.3
2845 Female, age 85, midline 25.7
2800 Male, age 61, midline 23.4
2142 Male, age 76, midline 14.7
Nucleus raphe pallidus
nTPM: 20.3
2183 Male, age 80, midline 24.1
2145 Male, age 76, midline 20.5
1924 Male, age 61, midline 16.2
Nucleus tractus solitarii
nTPM: 18.4
2191 Female, age 85, both hemispheres 20.0
2307 Male, age 80, both hemispheres 19.1
2144 Female, age 91, right hemisphere 17.7
2656 Male, age 76, both hemispheres 17.0
Paramedian reticular nucleus
nTPM: 22.2
2313 Male, age 61, both hemispheres 24.2
2050 Female, age 85, both hemispheres 22.7
2052 Male, age 76, both hemispheres 21.1
2057 Male, age 80, both hemispheres 20.6
Parvicellular reticular nuclei
nTPM: 21.6
2558 Male, age 74, both hemispheres 24.9
2095 Male, age 76, both hemispheres 20.3
2119 Male, age 80, both hemispheres 19.7
Parvicellular reticular nuclei, medullary
nTPM: 26.4
2189 Female, age 91, both hemispheres 27.6
2091 Female, age 85, both hemispheres 25.8
2181 Male, age 80, left hemisphere 25.8
Peritrigeminal nucleus
nTPM: 19.6
2179 Male, age 61, both hemispheres 22.7
2136 Male, age 76, both hemispheres 20.6
2067 Female, age 85, both hemispheres 15.5
Pontine nuclei
nTPM: 21.0
2319 Female, age 91, both hemispheres 24.7
2454 Male, age 74, left hemisphere 24.4
1863 Male, age 55, unknown 23.3
2787 Female, age 85, both hemispheres 22.1
1968 Male, age 76, left hemisphere 20.2
2115 Male, age 80, left hemisphere 19.4
2109 Female, age 72, unknown 17.5
2727 Male, age 61, right hemisphere 16.4
Pontine raphe nucleus
nTPM: 18.9
2853 Male, age 76, midline 20.7
2122 Female, age 85, midline 17.1
Posteroventral cochlear nucleus
nTPM: 21.6
2371 Male, age 61, both hemispheres 25.7
2135 Female, age 91, both hemispheres 22.6
2341 Male, age 80, both hemispheres 22.3
2070 Male, age 76, both hemispheres 19.0
2752 Female, age 85, both hemispheres 18.6
Prepositus hypoglossal nucleus
nTPM: 24.4
2086 Male, age 80, both hemispheres 25.2
2855 Female, age 85, right hemisphere 23.7
Principal sensory trigeminal nucleus
nTPM: 22.6
2324 Male, age 76, both hemispheres 27.8
2367 Female, age 91, left hemisphere 25.1
2158 Male, age 61, both hemispheres 20.4
2008 Male, age 80, left hemisphere 17.2
Reticular pontine nucleus, caudal
nTPM: 23.7
2457 Female, age 91, both hemispheres 26.0
2332 Male, age 80, right hemisphere 25.9
2559 Male, age 74, both hemispheres 25.4
2092 Male, age 76, both hemispheres 17.6
Reticular pontine nucleus, oral
nTPM: 24.4
2366 Female, age 91, both hemispheres 28.7
2167 Male, age 76, both hemispheres 27.7
1939 Male, age 80, both hemispheres 23.7
2361 Male, age 74, both hemispheres 21.7
2012 Female, age 85, both hemispheres 20.1
Reticulotegmental nucleus
nTPM: 29.5
2333 Male, age 80, both hemispheres 30.7
2452 Male, age 74, both hemispheres 30.6
2325 Male, age 76, both hemispheres 28.8
2322 Female, age 91, both hemispheres 27.9
Spinal trigeminal nucleus, caudal
nTPM: 22.0
2390 Female, age 91, both hemispheres 29.2
2312 Male, age 61, both hemispheres 23.7
2308 Male, age 80, both hemispheres 22.2
2447 Male, age 76, both hemispheres 20.8
2642 Male, age 74, both hemispheres 13.9
Spinal trigeminal nucleus, interpolar
nTPM: 24.2
2625 Male, age 61, both hemispheres 42.7
2389 Female, age 91, both hemispheres 24.7
2033 Male, age 80, both hemispheres 20.7
2386 Female, age 85, both hemispheres 17.3
2066 Male, age 76, right hemisphere 15.9
Spinal trigeminal nucleus, oral
nTPM: 24.9
2164 Male, age 80, both hemispheres 36.5
1978 Male, age 76, both hemispheres 20.8
2737 Female, age 85, both hemispheres 17.4
Spinal vestibular nucleus
nTPM: 24.3
2796 Male, age 61, both hemispheres 36.0
2384 Male, age 74, both hemispheres 23.3
2780 Male, age 80, both hemispheres 23.2
2748 Male, age 76, both hemispheres 22.3
2186 Female, age 91, both hemispheres 20.9
2806 Female, age 85, both hemispheres 20.0
Subcoeruleus area
nTPM: 22.7
2323 Female, age 91, left hemisphere 25.1
2451 Male, age 74, both hemispheres 25.0
2369 Female, age 85, left hemisphere 24.3
2089 Male, age 76, left hemisphere 20.0
1958 Male, age 80, both hemispheres 19.2
Superior olive
nTPM: 20.4
2561 Female, age 91, both hemispheres 27.9
2329 Male, age 80, right hemisphere 24.7
2020 Male, age 76, both hemispheres 17.2
1875 Female, age 85, both hemispheres 16.1
2364 Male, age 74, right hemisphere 16.1
Superior vestibular nucleus
nTPM: 17.6
2061 Male, age 76, both hemispheres 19.4
2015 Male, age 80, both hemispheres 18.7
2383 Male, age 74, both hemispheres 14.7
Ventral medullary reticular nucleus
nTPM: 24.3
2372 Male, age 61, both hemispheres 27.9
2060 Male, age 76, both hemispheres 20.7
Ventral periolivary nuclei
nTPM: 21.2
2794 Female, age 91, left hemisphere 23.9
2165 Male, age 80, both hemispheres 22.9
2130 Female, age 85, both hemispheres 20.8
2023 Male, age 76, both hemispheres 17.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 21.9
2180 Male, age 61, both hemispheres 27.2
2302 Female, age 91, both hemispheres 22.3
2118 Male, age 80, both hemispheres 21.8
2741 Female, age 85, both hemispheres 20.5
1986 Male, age 76, both hemispheres 17.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 23.9
2840 Female, age 85, both hemispheres 28.2
2456 Female, age 91, both hemispheres 27.3
2161 Male, age 80, both hemispheres 25.0
2359 Male, age 61, both hemispheres 22.9
2449 Male, age 74, both hemispheres 21.7
1959 Male, age 76, both hemispheres 17.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 197.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 197.6
FF:10182-103D2 60 years, female 272.5
FF:10165-103B3 76 years, female 122.7
Medulla oblongata
Scaled Tags Per Million: 131.5
FF:10174-103C3 60 years, female 156.2
FF:10038-101F2 18-64 years, mixed 149.1
FF:10155-103A2 76 years, female 89.3
Pons
Scaled Tags Per Million: 100.9
FF:10033-101E6 18-54 years, mixed 100.9

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 24.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 23.8
Samples: 4

Max nTPM: 26.7
Min nTPM: 21.1
Sample A Female 22.1
Sample B Female 25.3
Sample C Male 26.7
Sample D Male 21.1
Pons
nTPM: 24.2
Samples: 4

Max nTPM: 33.2
Min nTPM: 19.3
Sample A Female 33.2
Sample B Female 21.0
Sample C Male 19.3
Sample D Male 23.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 10.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 10.2
Samples: 4

Max nTPM: 10.6
Min nTPM: 9.8
Sample A Male 9.9
Sample B Male 10.4
Sample C Female 10.6
Sample D Female 9.8

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
69816392 Antisense, RP_050505_04_H11, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.1
69816392 Antisense, RP_050505_04_H11, Mouse strain C57BL/6J (56 days, male) 0.1

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