AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		75.847
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.2 nTPM
HPA:37.2 nTPM
GTEx:27.7 nTPM
FANTOM5:71.1 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:51.9 nTPM
Allen mouse:9.9 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA071015
Amygdala mean intensity 75.847
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 58.583
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 37.811
Cortical amygdala 71.957
Central amygdala 33.590
Medial amygdaloid nucleus 75.847

AMYGDALA - HPA Brain RNA-seq
Max nTPM 37.2
Sample id Sample description nTPM
Amygdala
nTPM: 37.2
2814 Male, age 76, right hemisphere 110.0
2695 Female, age 67, right hemisphere 22.0
2514 Male, age 75, right hemisphere 19.7
2517 Female, age 94, left hemisphere 19.4
1987 Female, age 91, left hemisphere 14.8
Basal amygdala
nTPM: 27.1
1955 Male, age 76, both hemispheres 58.8
2827 Female, age 67, right hemisphere 29.0
2685 Female, age 94, left hemisphere 24.8
2609 Male, age 75, right hemisphere 18.3
2243 Female, age 91, right hemisphere 17.7
2110 Male, age 80, left hemisphere 13.9
Central amygdala
nTPM: 35.2
1905 Male, age 76, both hemispheres 94.4
2826 Female, age 94, left hemisphere 28.2
2701 Female, age 91, right hemisphere 19.7
2515 Male, age 75, right hemisphere 19.0
2239 Male, age 80, left hemisphere 14.9
Corticomedial amygdala
nTPM: 25.6
2240 Male, age 76, both hemispheres 50.7
2535 Female, age 67, right hemisphere 29.5
2242 Female, age 91, right hemisphere 20.3
2429 Female, age 94, left hemisphere 19.6
2428 Male, age 75, right hemisphere 17.6
2829 Male, age 80, left hemisphere 16.2
Lateral amygdala
nTPM: 29.2
1883 Male, age 76, both hemispheres 77.1
2534 Female, age 94, left hemisphere 23.9
2830 Female, age 67, right hemisphere 23.0
2516 Male, age 75, right hemisphere 21.9
2255 Female, age 91, right hemisphere 17.0
2256 Male, age 80, left hemisphere 12.3
Stria terminalis, bed nucleus
nTPM: 24.0
1974 Female, age 91, both hemispheres 25.3
2486 Female, age 94, both hemispheres 25.3
2201 Male, age 74, unknown 21.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 27.7
Samples: 152

Max nTPM: 98.2
Min nTPM: 4.6
Std nTPM: 12.5
Median nTPM: 24.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 98.2
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 60.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 59.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 55.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 54.7
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 53.2
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 53.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 52.6
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 52.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 52.6
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 47.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 71.1
FF:10151-102I7 76 years, female 71.1

AMYGDALA - Pig RNA-seqi
Average nTPM 22.4
Pig sample Sample description nTPM
Amygdala
nTPM: 22.4
Samples: 4

Max nTPM: 35.8
Min nTPM: 17.0
Sample A Female 35.8
Sample B Female 18.6
Sample C Male 17.0
Sample D Male 18.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 51.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 51.9
Samples: 4

Max nTPM: 57.6
Min nTPM: 47.9
Sample A Male 57.6
Sample B Male 47.9
Sample C Female 52.0
Sample D Female 50.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.9
67936411 Antisense, RP_040617_01_E09, Mouse strain C57BL/6J (56 days, male) 9.9
324214 Antisense, RP_040617_01_E09, Mouse strain C57BL/6J (56 days, male) 5.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.