HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.4 nTPM
HPA:28.4 nTPM
GTEx:41.7 nTPM
FANTOM5:64.7 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:0.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Hippocampus
nTPM: 26.3
1911 Female, age 85, right hemisphere 28.2
1898 Male, age 80, left hemisphere 27.4
1855 Male, age 76, left hemisphere 26.5
2529 Female, age 94, left hemisphere 26.3
2621 Female, age 67, right hemisphere 25.5
2148 Female, age 91, left hemisphere 24.1
Dentate gyrus
nTPM: 25.9
2528 Male, age 74, both hemispheres 28.2
1927 Female, age 91, both hemispheres 28.0
2246 Female, age 85, both hemispheres 26.1
2010 Male, age 76, both hemispheres 26.0
2530 Female, age 94, left hemisphere 24.7
2531 Female, age 67, both hemispheres 22.4
Entorhinal gyrus
nTPM: 25.3
1938 Female, age 85, left hemisphere 27.1
1787 Male, age 76, left hemisphere 26.7
2117 Female, age 91, right hemisphere 26.2
2764 Male, age 80, right hemisphere 25.8
2613 Female, age 94, left hemisphere 23.9
2686 Male, age 75, right hemisphere 22.4
Hippocampus, CA1
nTPM: 26.1
2527 Male, age 74, both hemispheres 28.4
1873 Female, age 85, both hemispheres 26.6
2045 Male, age 76, both hemispheres 25.5
2749 Male, age 80, left hemisphere 25.4
2082 Female, age 91, right hemisphere 24.6
Hippocampus, CA2
nTPM: 26.5
2249 Male, age 74, both hemispheres 27.8
1963 Male, age 80, left hemisphere 27.6
2113 Female, age 91, right hemisphere 27.2
1892 Male, age 76, both hemispheres 25.8
1940 Female, age 85, left hemisphere 25.7
2437 Female, age 94, left hemisphere 24.8
Hippocampus, CA3
nTPM: 26.1
2436 Male, age 74, both hemispheres 29.2
1891 Female, age 85, both hemispheres 28.4
1867 Male, age 76, both hemispheres 26.8
2137 Male, age 80, left hemisphere 25.7
2620 Female, age 94, left hemisphere 24.6
2861 Female, age 67, both hemispheres 22.2
Parahippocampal cortex
nTPM: 26.9
1850 Male, age 80, both hemispheres 28.7
1933 Female, age 85, both hemispheres 28.3
1990 Female, age 91, right hemisphere 28.1
2693 Female, age 94, both hemispheres 28.0
2250 Female, age 67, right hemisphere 27.3
2532 Female, age 72, left hemisphere 27.2
2018 Male, age 76, both hemispheres 27.1
2692 Male, age 74, both hemispheres 25.9
2245 Female, age 91, both hemispheres 24.3
2622 Female, age 67, right hemisphere 24.1
Perirhinal gyrus
nTPM: 28.4
1841 Female, age 85, right hemisphere 29.2
1794 Male, age 80, right hemisphere 28.5
1847 Female, age 91, left hemisphere 28.5
2521 Female, age 94, right hemisphere 28.5
2848 Male, age 76, right hemisphere 27.5
Subiculum
nTPM: 25.7
1901 Male, age 80, both hemispheres 26.6
2619 Male, age 74, both hemispheres 26.6
2729 Female, age 91, right hemisphere 26.4
1977 Female, age 85, both hemispheres 25.7
2438 Female, age 94, left hemisphere 25.4
2042 Male, age 76, both hemispheres 23.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.7
Samples: 197

Max nTPM: 58.8
Min nTPM: 21.3
Std nTPM: 6.6
Median nTPM: 41.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 58.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 56.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 56.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 55.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 55.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 55.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 55.2
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 54.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 53.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 53.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 52.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.7
FF:10169-103B7 60 years, female 73.2
FF:10153-102I9 76 years, female 56.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.0
Sample A Female 14.6
Sample B Female 11.4
Sample C Male 11.5
Sample D Male 10.0
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.8
Sample A Female 8.9
Sample B Female 10.5
Sample C Male 11.0
Sample D Male 8.8
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 11.8
Min nTPM: 10.2
Sample A Female 11.8
Sample B Female 10.7
Sample C Male 10.2
Sample D Male 11.0
Ventral hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.2
Sample A Female 11.7
Sample B Female 10.3
Sample C Male 10.2
Sample D Male 12.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.2
Sample A Male 11.9
Sample B Male 11.3
Sample C Female 12.6
Sample D Female 9.2
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 12.5
Min nTPM: 6.9
Sample A Male 12.5
Sample B Male 9.2
Sample C Female 6.9
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
75826638 Antisense, RP_060601_01_C06, Mouse strain C57BL/6J (56 days, male) 0.3
Hippocampal formation
Expression energy: 0.3
75826638 Antisense, RP_060601_01_C06, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

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