HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:56.8 nTPM
HPA:56.8 nTPM
GTEx:58.1 nTPM
FANTOM5:31.9 Scaled Tags Per Million
Pig:59.6 nTPM
Mouse:73.5 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046114
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.8
Sample id Sample description nTPM
Hippocampus
nTPM: 53.5
1898 Male, age 80, left hemisphere 59.4
1855 Male, age 76, left hemisphere 54.3
2529 Female, age 94, left hemisphere 52.7
1911 Female, age 85, right hemisphere 52.3
2621 Female, age 67, right hemisphere 52.1
2148 Female, age 91, left hemisphere 49.8
Dentate gyrus
nTPM: 52.5
1927 Female, age 91, both hemispheres 55.3
2010 Male, age 76, both hemispheres 55.1
2528 Male, age 74, both hemispheres 53.4
2530 Female, age 94, left hemisphere 53.1
2246 Female, age 85, both hemispheres 50.5
2531 Female, age 67, both hemispheres 47.6
Entorhinal gyrus
nTPM: 52.7
1938 Female, age 85, left hemisphere 56.2
2764 Male, age 80, right hemisphere 53.8
1787 Male, age 76, left hemisphere 53.5
2117 Female, age 91, right hemisphere 52.2
2613 Female, age 94, left hemisphere 50.4
2686 Male, age 75, right hemisphere 50.0
Hippocampus, CA1
nTPM: 54.2
2749 Male, age 80, left hemisphere 58.8
2527 Male, age 74, both hemispheres 55.6
1873 Female, age 85, both hemispheres 55.3
2045 Male, age 76, both hemispheres 50.8
2082 Female, age 91, right hemisphere 50.2
Hippocampus, CA2
nTPM: 54.9
1963 Male, age 80, left hemisphere 59.1
2249 Male, age 74, both hemispheres 58.1
1892 Male, age 76, both hemispheres 57.6
2437 Female, age 94, left hemisphere 52.6
1940 Female, age 85, left hemisphere 51.7
2113 Female, age 91, right hemisphere 50.3
Hippocampus, CA3
nTPM: 53.5
2436 Male, age 74, both hemispheres 62.5
1867 Male, age 76, both hemispheres 54.7
2137 Male, age 80, left hemisphere 54.7
1891 Female, age 85, both hemispheres 53.2
2620 Female, age 94, left hemisphere 48.6
2861 Female, age 67, both hemispheres 47.5
Parahippocampal cortex
nTPM: 53.7
1850 Male, age 80, both hemispheres 59.7
1933 Female, age 85, both hemispheres 55.5
2250 Female, age 67, right hemisphere 54.8
2693 Female, age 94, both hemispheres 54.8
1990 Female, age 91, right hemisphere 54.2
2018 Male, age 76, both hemispheres 53.5
2532 Female, age 72, left hemisphere 52.2
2692 Male, age 74, both hemispheres 52.1
2245 Female, age 91, both hemispheres 51.8
2622 Female, age 67, right hemisphere 48.3
Perirhinal gyrus
nTPM: 56.8
1794 Male, age 80, right hemisphere 59.1
1847 Female, age 91, left hemisphere 59.1
1841 Female, age 85, right hemisphere 57.5
2848 Male, age 76, right hemisphere 54.3
2521 Female, age 94, right hemisphere 54.0
Subiculum
nTPM: 52.6
1901 Male, age 80, both hemispheres 53.5
1977 Female, age 85, both hemispheres 53.3
2438 Female, age 94, left hemisphere 53.2
2619 Male, age 74, both hemispheres 53.1
2042 Male, age 76, both hemispheres 51.8
2729 Female, age 91, right hemisphere 50.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.1
Samples: 197

Max nTPM: 147.4
Min nTPM: 34.4
Std nTPM: 14.7
Median nTPM: 56.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 95.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 95.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 93.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 85.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 85.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 84.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 83.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 83.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 81.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.9
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 20.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 74.3
Min nTPM: 41.6
Sample A Female 74.3
Sample B Female 58.3
Sample C Male 64.3
Sample D Male 41.6
Entorhinal cortex
nTPM: 56.9
Samples: 4

Max nTPM: 71.4
Min nTPM: 41.0
Sample A Female 47.9
Sample B Female 71.4
Sample C Male 67.1
Sample D Male 41.0
Subiculum
nTPM: 53.2
Samples: 4

Max nTPM: 72.8
Min nTPM: 42.3
Sample A Female 72.8
Sample B Female 48.2
Sample C Male 49.6
Sample D Male 42.3
Ventral hippocampus
nTPM: 52.9
Samples: 4

Max nTPM: 61.8
Min nTPM: 45.4
Sample A Female 61.8
Sample B Female 45.4
Sample C Male 55.9
Sample D Male 48.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.1
Samples: 4

Max nTPM: 82.7
Min nTPM: 61.7
Sample A Male 61.7
Sample B Male 61.8
Sample C Female 82.7
Sample D Female 62.3
Hippocampal formation
nTPM: 73.5
Samples: 4

Max nTPM: 79.9
Min nTPM: 66.8
Sample A Male 79.9
Sample B Male 66.8
Sample C Female 70.7
Sample D Female 76.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68744773 Antisense, RP_050208_01_F04, Mouse strain C57BL/6J (56 days, male) 0.9

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