HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.9 nTPM
HPA:27.9 nTPM
GTEx:13.2 nTPM
FANTOM5:132.6 Scaled Tags Per Million
Pig:13.5 nTPM
Mouse:2.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB070159
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
2529 Female, age 94, left hemisphere 39.5
2621 Female, age 67, right hemisphere 28.9
2148 Female, age 91, left hemisphere 28.4
1855 Male, age 76, left hemisphere 26.7
1898 Male, age 80, left hemisphere 23.0
1911 Female, age 85, right hemisphere 20.7
Dentate gyrus
nTPM: 22.5
2530 Female, age 94, left hemisphere 31.6
2010 Male, age 76, both hemispheres 27.3
2528 Male, age 74, both hemispheres 22.5
2246 Female, age 85, both hemispheres 21.7
2531 Female, age 67, both hemispheres 17.7
1927 Female, age 91, both hemispheres 14.1
Entorhinal gyrus
nTPM: 18.3
2117 Female, age 91, right hemisphere 27.8
2686 Male, age 75, right hemisphere 26.2
1787 Male, age 76, left hemisphere 17.3
2613 Female, age 94, left hemisphere 14.0
1938 Female, age 85, left hemisphere 12.8
2764 Male, age 80, right hemisphere 11.6
Hippocampus, CA1
nTPM: 21.9
2527 Male, age 74, both hemispheres 33.8
2082 Female, age 91, right hemisphere 24.4
1873 Female, age 85, both hemispheres 23.8
2749 Male, age 80, left hemisphere 16.1
2045 Male, age 76, both hemispheres 11.5
Hippocampus, CA2
nTPM: 22.0
2249 Male, age 74, both hemispheres 30.9
2113 Female, age 91, right hemisphere 27.8
1940 Female, age 85, left hemisphere 24.4
2437 Female, age 94, left hemisphere 20.0
1963 Male, age 80, left hemisphere 18.6
1892 Male, age 76, both hemispheres 10.5
Hippocampus, CA3
nTPM: 18.9
2861 Female, age 67, both hemispheres 28.9
2620 Female, age 94, left hemisphere 27.9
1891 Female, age 85, both hemispheres 18.1
2436 Male, age 74, both hemispheres 15.7
1867 Male, age 76, both hemispheres 11.4
2137 Male, age 80, left hemisphere 11.4
Parahippocampal cortex
nTPM: 16.9
2622 Female, age 67, right hemisphere 27.9
2692 Male, age 74, both hemispheres 27.7
2245 Female, age 91, both hemispheres 21.1
2250 Female, age 67, right hemisphere 20.6
1990 Female, age 91, right hemisphere 16.0
1933 Female, age 85, both hemispheres 12.9
2532 Female, age 72, left hemisphere 12.8
2018 Male, age 76, both hemispheres 10.7
2693 Female, age 94, both hemispheres 10.6
1850 Male, age 80, both hemispheres 9.0
Perirhinal gyrus
nTPM: 10.6
1847 Female, age 91, left hemisphere 12.8
2521 Female, age 94, right hemisphere 11.9
1794 Male, age 80, right hemisphere 10.7
1841 Female, age 85, right hemisphere 9.2
2848 Male, age 76, right hemisphere 8.3
Subiculum
nTPM: 22.1
2619 Male, age 74, both hemispheres 34.8
2729 Female, age 91, right hemisphere 29.4
2042 Male, age 76, both hemispheres 23.9
2438 Female, age 94, left hemisphere 17.9
1901 Male, age 80, both hemispheres 14.0
1977 Female, age 85, both hemispheres 12.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 57.3
Min nTPM: 3.4
Std nTPM: 6.9
Median nTPM: 11.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 57.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 37.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 32.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 31.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 30.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 29.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 28.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 27.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 27.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 26.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 24.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 132.6
FF:10153-102I9 76 years, female 142.9
FF:10169-103B7 60 years, female 122.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.7
Sample A Female 12.4
Sample B Female 9.7
Sample C Male 11.8
Sample D Male 10.6
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.2
Sample A Female 12.7
Sample B Female 11.0
Sample C Male 12.8
Sample D Male 9.2
Subiculum
nTPM: 13.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.2
Sample A Female 15.2
Sample B Female 12.2
Sample C Male 12.9
Sample D Male 13.6
Ventral hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 16.4
Min nTPM: 11.0
Sample A Female 11.5
Sample B Female 11.3
Sample C Male 16.4
Sample D Male 11.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.3
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.9
Sample A Male 2.3
Sample B Male 1.9
Sample C Female 2.8
Sample D Female 2.1
Hippocampal formation
nTPM: 2.6
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.2
Sample A Male 2.4
Sample B Male 3.0
Sample C Female 2.2
Sample D Female 2.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
76135666 Antisense, RP_060711_06_E01, Mouse strain C57BL/6J (56 days, male) 0.4

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