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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA026578
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1536.2
Min nTPM: 313.6
Std nTPM: 250.7
Median nTPM:
352_1
62 years, male
1536.2
218_1
71 years, female
1529.6
386_1
76 years, male
1329.5
354_1
81 years, female
1306.6
319_1
81 years, male
1283.9
237_1
82 years, male
1247.5
355_1
70 years, female
1242.9
316_1
62 years, male
1220.5
163_1
78 years, male
1220.1
172_1
72 years, female
1189.0
322_1
76 years, male
1180.5
6_1
73 years, female
1172.3
375_1
74 years, female
1144.0
321_1
62 years, female
1122.6
405_1
91 years, male
1120.9
35_1
74 years, female
1105.5
447_1
81 years, male
1098.4
425_1
59 years, female
1090.1
377_1
82 years, female
1071.1
292_1
71 years, male
1068.8
350_1
84 years, female
1039.4
229_1
69 years, female
1038.9
356_1
87 years, female
1028.0
318_1
68 years, male
1004.1
320_1
89 years, female
997.1
353_1
82 years, female
992.5
189_1
76 years, male
990.1
243_1
75 years, male
988.7
379_1
60 years, male
976.5
153_1
70 years, female
967.6
246_1
77 years, male
967.1
389_1
86 years, female
963.7
480_1
63 years, male
963.1
526_1
61 years, male
962.4
293_1
68 years, female
950.6
251_1
78 years, male
932.2
126_1
63 years, male
929.6
376_1
75 years, female
917.0
518_1
75 years, female
912.4
286_1
68 years, female
909.2
335_1
73 years, female
903.5
394_1
75 years, female
901.8
217_1
76 years, male
896.1
503_1
68 years, male
886.5
349_1
83 years, male
883.3
307_1
66 years, female
876.8
348_1
84 years, male
866.0
347_1
72 years, male
859.0
404_1
82 years, female
835.1
468_1
89 years, male
830.5
406_1
79 years, male
826.4
137_1
83 years, male
817.6
177_1
74 years, male
817.0
9_1
66 years, female
808.2
117_1
61 years, male
807.8
81_1
67 years, male
807.3
291_1
76 years, male
789.9
466_1
57 years, female
784.0
415_1
77 years, female
781.1
324_1
76 years, male
771.7
517_1
88 years, male
762.1
17_1
71 years, male
753.2
43_1
64 years, female
747.9
266_1
85 years, male
744.5
2_1
77 years, female
738.9
351_1
91 years, male
733.1
145_1
84 years, male
719.4
311_1
78 years, male
717.9
499_1
55 years, female
709.4
115_1
83 years, male
708.4
396_1
62 years, male
703.3
495_1
57 years, female
702.1
18_1
88 years, male
700.9
99_1
64 years, male
697.1
265_1
87 years, male
694.3
173_1
67 years, male
689.8
384_1
83 years, male
682.7
490_1
67 years, female
679.6
142_1
61 years, female
665.2
254_1
77 years, female
659.7
317_1
60 years, male
657.3
288_1
66 years, female
655.0
264_1
73 years, female
644.6
162_1
79 years, female
633.0
4_1
88 years, female
624.1
506_1
65 years, male
615.1
120_1
70 years, female
599.6
452_1
88 years, female
589.2
42_1
85 years, male
560.3
313_1
79 years, female
552.0
32_1
67 years, male
545.8
139_1
64 years, female
533.3
315_1
62 years, female
523.3
491_1
89 years, female
517.0
295_1
61 years, female
514.9
414_1
84 years, female
506.1
119_1
70 years, female
505.2
109_1
81 years, female
501.0
149_1
88 years, male
488.5
314_1
67 years, male
441.9
41_1
94 years, female
426.0
308_1
70 years, female
400.8
413_1
59 years, female
380.5
89_1
63 years, male
380.2
501_1
88 years, male
313.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.