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ATP1B2
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  • ATP1B2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:315.6 nTPM
FANTOM5:1278.4 Scaled Tags Per Million
Pig:237.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA010698
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 315.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 315.6
Samples: 246

Max nTPM: 823.0
Min nTPM: 32.9
Std nTPM: 143.3
Median nTPM: 287.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 823.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 803.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 751.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 694.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 653.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 638.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 636.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 629.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 613.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 609.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 607.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 591.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 590.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 588.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 566.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 565.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 558.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 551.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 531.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 530.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 530.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 530.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 526.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 520.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 519.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 517.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 514.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 501.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 492.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 491.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 486.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 486.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 484.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 482.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 481.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 480.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 477.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 471.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 469.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 466.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 465.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 465.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 463.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 461.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 458.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 456.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 455.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 441.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 438.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 433.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 431.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 424.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 424.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 418.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 418.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 416.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 415.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 413.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 412.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 410.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 403.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 400.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 396.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 396.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 396.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 393.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 387.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 382.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 379.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 378.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 376.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 373.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 371.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 371.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 369.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 367.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 360.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 357.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 353.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 352.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 349.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 346.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 341.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 340.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 338.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 338.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 337.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 336.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 335.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 334.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 333.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 333.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 329.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 329.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 326.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 323.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 323.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 320.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 318.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 318.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 318.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 317.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 314.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 313.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 312.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 311.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 309.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 308.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 306.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 302.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 301.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 300.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 299.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 299.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 298.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 298.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 297.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 295.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 295.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 294.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 294.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 288.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 288.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 287.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 286.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 285.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 284.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 282.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 282.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 280.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 279.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 278.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 278.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 278.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 278.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 274.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 273.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 269.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 267.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 265.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 265.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 262.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 261.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 261.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 261.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 257.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 256.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 256.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 254.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 254.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 253.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 250.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 250.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 250.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 248.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 247.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 245.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 245.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 244.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 244.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 243.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 242.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 240.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 240.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 239.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 239.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 238.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 236.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 236.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 236.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 236.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 232.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 232.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 230.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 228.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 226.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 226.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 226.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 226.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 225.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 224.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 223.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 223.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 222.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 215.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 215.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 213.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 213.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 212.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 209.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 207.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 206.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 205.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 204.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 202.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 202.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 201.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 200.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 200.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 196.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 195.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 193.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 189.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 187.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 186.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 186.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 185.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 183.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 182.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 182.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 179.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 176.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 174.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 174.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 174.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 174.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 172.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 171.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 169.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 168.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 167.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 166.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 165.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 161.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 156.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 152.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 151.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 148.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 142.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 132.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 129.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 128.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 126.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 120.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 118.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 114.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 94.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 80.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 76.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 72.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 50.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 43.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 36.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 32.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1278.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1278.4
FF:10164-103B2 76 years, female 1278.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 237.9
Pig sample Sample description nTPM
Caudate
nTPM: 237.9
Samples: 4

Max nTPM: 324.9
Min nTPM: 175.5
Sample A Female 175.5
Sample B Female 229.3
Sample C Male 324.9
Sample D Male 221.7

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