HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.2 nTPM
HPA:33.2 nTPM
GTEx:34.8 nTPM
FANTOM5:22.2 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:63.8 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022997Antibody CAB011205
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.2
Sample id Sample description nTPM
Hippocampus
nTPM: 31.0
1898 Male, age 80, left hemisphere 34.6
2621 Female, age 67, right hemisphere 33.7
2529 Female, age 94, left hemisphere 31.4
1855 Male, age 76, left hemisphere 30.1
2148 Female, age 91, left hemisphere 28.7
1911 Female, age 85, right hemisphere 27.7
Dentate gyrus
nTPM: 30.9
2530 Female, age 94, left hemisphere 34.5
1927 Female, age 91, both hemispheres 31.5
2531 Female, age 67, both hemispheres 31.1
2010 Male, age 76, both hemispheres 31.0
2246 Female, age 85, both hemispheres 29.5
2528 Male, age 74, both hemispheres 28.1
Entorhinal gyrus
nTPM: 32.2
2764 Male, age 80, right hemisphere 35.2
2613 Female, age 94, left hemisphere 34.8
1787 Male, age 76, left hemisphere 31.2
1938 Female, age 85, left hemisphere 31.2
2686 Male, age 75, right hemisphere 30.6
2117 Female, age 91, right hemisphere 30.5
Hippocampus, CA1
nTPM: 31.7
2749 Male, age 80, left hemisphere 39.9
1873 Female, age 85, both hemispheres 32.4
2527 Male, age 74, both hemispheres 31.0
2045 Male, age 76, both hemispheres 29.0
2082 Female, age 91, right hemisphere 26.3
Hippocampus, CA2
nTPM: 31.3
1963 Male, age 80, left hemisphere 37.1
1892 Male, age 76, both hemispheres 33.9
2437 Female, age 94, left hemisphere 31.4
1940 Female, age 85, left hemisphere 29.9
2113 Female, age 91, right hemisphere 28.5
2249 Male, age 74, both hemispheres 26.6
Hippocampus, CA3
nTPM: 31.8
2620 Female, age 94, left hemisphere 36.0
2137 Male, age 80, left hemisphere 34.2
1867 Male, age 76, both hemispheres 31.6
2861 Female, age 67, both hemispheres 30.7
1891 Female, age 85, both hemispheres 30.3
2436 Male, age 74, both hemispheres 27.9
Parahippocampal cortex
nTPM: 30.0
1850 Male, age 80, both hemispheres 33.6
2245 Female, age 91, both hemispheres 32.1
1990 Female, age 91, right hemisphere 31.0
2693 Female, age 94, both hemispheres 30.6
1933 Female, age 85, both hemispheres 30.0
2692 Male, age 74, both hemispheres 29.6
2532 Female, age 72, left hemisphere 29.4
2250 Female, age 67, right hemisphere 28.6
2622 Female, age 67, right hemisphere 28.4
2018 Male, age 76, both hemispheres 26.9
Perirhinal gyrus
nTPM: 33.2
1794 Male, age 80, right hemisphere 36.4
1847 Female, age 91, left hemisphere 34.2
1841 Female, age 85, right hemisphere 32.8
2521 Female, age 94, right hemisphere 32.0
2848 Male, age 76, right hemisphere 30.6
Subiculum
nTPM: 29.7
1901 Male, age 80, both hemispheres 32.7
1977 Female, age 85, both hemispheres 30.6
2438 Female, age 94, left hemisphere 30.3
2042 Male, age 76, both hemispheres 29.5
2619 Male, age 74, both hemispheres 28.9
2729 Female, age 91, right hemisphere 26.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.8
Samples: 197

Max nTPM: 65.2
Min nTPM: 19.8
Std nTPM: 6.8
Median nTPM: 34.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 65.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 51.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 49.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 49.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 48.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 47.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 47.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 47.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 47.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 46.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 46.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.2
FF:10153-102I9 76 years, female 29.9
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.0
Samples: 4

Max nTPM: 37.4
Min nTPM: 24.2
Sample A Female 37.4
Sample B Female 32.5
Sample C Male 29.8
Sample D Male 24.2
Entorhinal cortex
nTPM: 27.4
Samples: 4

Max nTPM: 29.7
Min nTPM: 24.3
Sample A Female 29.7
Sample B Female 27.6
Sample C Male 27.8
Sample D Male 24.3
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 34.1
Min nTPM: 22.9
Sample A Female 34.1
Sample B Female 24.5
Sample C Male 28.2
Sample D Male 22.9
Ventral hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 36.8
Min nTPM: 20.3
Sample A Female 29.3
Sample B Female 20.3
Sample C Male 36.8
Sample D Male 33.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 59.7
Min nTPM: 55.8
Sample A Male 57.3
Sample B Male 55.8
Sample C Female 57.5
Sample D Female 59.7
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 68.2
Min nTPM: 58.2
Sample A Male 58.2
Sample B Male 66.6
Sample C Female 68.2
Sample D Female 62.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
68862108 Antisense, RP_050301_01_E09, Mouse strain C57BL/6J (56 days, male) 14.4

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