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SLC44A2
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  • SLC44A2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:68.8 nTPM
FANTOM5:81.5 Scaled Tags Per Million
Pig:50.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003228
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 68.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 68.8
Samples: 246

Max nTPM: 160.5
Min nTPM: 24.3
Std nTPM: 21.4
Median nTPM: 68.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 160.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 153.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 144.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 134.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 117.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 116.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 113.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 112.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 109.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 107.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 104.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 104.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 104.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 101.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 101.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 100.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 98.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 96.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 95.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 95.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 94.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 93.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 93.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 92.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 91.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 90.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 90.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 88.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 88.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 88.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 88.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 87.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 87.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 87.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 87.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 86.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 86.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 86.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 86.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 86.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 85.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 85.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 85.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 84.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 84.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 84.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 82.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 81.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 81.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 81.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 81.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 80.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 80.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 80.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 80.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 80.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 79.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 79.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 79.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 79.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 78.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 78.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 77.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 77.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 77.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 76.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 76.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 75.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 75.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 75.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 75.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 74.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 74.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 74.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 74.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 74.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 74.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 74.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 74.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 73.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 73.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 73.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 73.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 73.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 72.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 72.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 72.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 72.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 72.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 72.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 71.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 71.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 71.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 71.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 71.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 70.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 70.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 70.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 69.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 69.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 69.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 69.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 69.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 69.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 69.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 69.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 69.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 68.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 68.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 68.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 68.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 68.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 67.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 67.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 67.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 67.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 66.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 66.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 65.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 65.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 64.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 64.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 64.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 64.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 63.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 63.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 63.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 63.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 62.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 62.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 62.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 61.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 60.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 60.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 60.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 60.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 60.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 59.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 59.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 59.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 59.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 58.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 57.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 57.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 57.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 57.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 57.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 57.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 56.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 56.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 55.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 55.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 55.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 55.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 54.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 54.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 54.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 53.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 53.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 52.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 52.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 52.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 52.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 52.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 52.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 51.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 51.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 50.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 50.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 50.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 49.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 49.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 48.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 47.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 47.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 47.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 47.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 46.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 46.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 46.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 45.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 45.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 45.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 45.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 45.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 43.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 41.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 41.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 41.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 40.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 40.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 40.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 40.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 39.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 39.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 39.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 38.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 38.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 37.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 37.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 32.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 31.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 29.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 25.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 24.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 24.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 24.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 81.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.5
FF:10164-103B2 76 years, female 81.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.9
Pig sample Sample description nTPM
Caudate
nTPM: 50.9
Samples: 4

Max nTPM: 62.6
Min nTPM: 38.9
Sample A Female 38.9
Sample B Female 53.6
Sample C Male 62.6
Sample D Male 48.5

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