HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:39.4 nTPM
HPA:39.4 nTPM
GTEx:70.1 nTPM
FANTOM5:85.6 Scaled Tags Per Million
Pig:134.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.6
1898 Male, age 80, left hemisphere 39.7
1855 Male, age 76, left hemisphere 37.7
2621 Female, age 67, right hemisphere 32.0
1911 Female, age 85, right hemisphere 31.1
2148 Female, age 91, left hemisphere 24.9
2529 Female, age 94, left hemisphere 23.9
Dentate gyrus
nTPM: 32.2
1927 Female, age 91, both hemispheres 51.7
2010 Male, age 76, both hemispheres 34.4
2531 Female, age 67, both hemispheres 29.9
2530 Female, age 94, left hemisphere 29.7
2246 Female, age 85, both hemispheres 28.5
2528 Male, age 74, both hemispheres 19.3
Entorhinal gyrus
nTPM: 17.0
2613 Female, age 94, left hemisphere 31.4
1938 Female, age 85, left hemisphere 22.2
1787 Male, age 76, left hemisphere 17.4
2686 Male, age 75, right hemisphere 12.4
2764 Male, age 80, right hemisphere 9.8
2117 Female, age 91, right hemisphere 9.0
Hippocampus, CA1
nTPM: 39.4
2749 Male, age 80, left hemisphere 71.7
1873 Female, age 85, both hemispheres 42.2
2045 Male, age 76, both hemispheres 32.1
2527 Male, age 74, both hemispheres 30.0
2082 Female, age 91, right hemisphere 20.8
Hippocampus, CA2
nTPM: 33.2
1963 Male, age 80, left hemisphere 69.0
1892 Male, age 76, both hemispheres 50.5
2437 Female, age 94, left hemisphere 28.2
2113 Female, age 91, right hemisphere 20.6
2249 Male, age 74, both hemispheres 18.7
1940 Female, age 85, left hemisphere 12.1
Hippocampus, CA3
nTPM: 34.6
2137 Male, age 80, left hemisphere 61.8
1867 Male, age 76, both hemispheres 37.4
2620 Female, age 94, left hemisphere 34.9
1891 Female, age 85, both hemispheres 27.8
2861 Female, age 67, both hemispheres 26.2
2436 Male, age 74, both hemispheres 19.5
Parahippocampal cortex
nTPM: 17.3
2245 Female, age 91, both hemispheres 26.4
2250 Female, age 67, right hemisphere 23.7
2018 Male, age 76, both hemispheres 21.1
1990 Female, age 91, right hemisphere 18.3
2693 Female, age 94, both hemispheres 16.9
1850 Male, age 80, both hemispheres 15.9
1933 Female, age 85, both hemispheres 15.5
2692 Male, age 74, both hemispheres 13.0
2622 Female, age 67, right hemisphere 12.5
2532 Female, age 72, left hemisphere 10.1
Perirhinal gyrus
nTPM: 20.2
1847 Female, age 91, left hemisphere 29.3
2521 Female, age 94, right hemisphere 23.6
1841 Female, age 85, right hemisphere 19.7
1794 Male, age 80, right hemisphere 14.7
2848 Male, age 76, right hemisphere 13.7
Subiculum
nTPM: 20.0
1901 Male, age 80, both hemispheres 26.9
1977 Female, age 85, both hemispheres 23.5
2438 Female, age 94, left hemisphere 22.2
2042 Male, age 76, both hemispheres 17.6
2729 Female, age 91, right hemisphere 17.0
2619 Male, age 74, both hemispheres 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.1
Samples: 197

Max nTPM: 185.3
Min nTPM: 1.3
Std nTPM: 46.0
Median nTPM: 64.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 185.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 181.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 175.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 165.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 159.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 158.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 157.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 157.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 156.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 153.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 153.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.6
FF:10169-103B7 60 years, female 105.6
FF:10153-102I9 76 years, female 65.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 134.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 134.6
Samples: 4

Max nTPM: 163.3
Min nTPM: 90.7
Sample A Female 163.3
Sample B Female 135.7
Sample C Male 90.7
Sample D Male 148.7
Entorhinal cortex
nTPM: 96.6
Samples: 4

Max nTPM: 108.7
Min nTPM: 74.0
Sample A Female 108.7
Sample B Female 97.0
Sample C Male 106.8
Sample D Male 74.0
Subiculum
nTPM: 86.0
Samples: 4

Max nTPM: 118.5
Min nTPM: 67.8
Sample A Female 118.5
Sample B Female 78.3
Sample C Male 79.5
Sample D Male 67.8
Ventral hippocampus
nTPM: 111.9
Samples: 4

Max nTPM: 118.7
Min nTPM: 104.3
Sample A Female 118.5
Sample B Female 104.3
Sample C Male 106.2
Sample D Male 118.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.