HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.2 nTPM
HPA:14.2 nTPM
GTEx:31.4 nTPM
FANTOM5:37.3 Scaled Tags Per Million
Pig:17.2 nTPM
Mouse:20.6 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052293Antibody HPA057034
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
2621 Female, age 67, right hemisphere 18.7
2529 Female, age 94, left hemisphere 18.3
1911 Female, age 85, right hemisphere 14.7
2148 Female, age 91, left hemisphere 9.7
1898 Male, age 80, left hemisphere 7.7
1855 Male, age 76, left hemisphere 3.7
Dentate gyrus
nTPM: 9.0
1927 Female, age 91, both hemispheres 15.5
2530 Female, age 94, left hemisphere 13.5
2246 Female, age 85, both hemispheres 7.7
2531 Female, age 67, both hemispheres 6.4
2010 Male, age 76, both hemispheres 5.6
2528 Male, age 74, both hemispheres 5.5
Entorhinal gyrus
nTPM: 12.7
2613 Female, age 94, left hemisphere 25.2
1787 Male, age 76, left hemisphere 15.2
2764 Male, age 80, right hemisphere 12.1
1938 Female, age 85, left hemisphere 11.6
2686 Male, age 75, right hemisphere 8.6
2117 Female, age 91, right hemisphere 3.4
Hippocampus, CA1
nTPM: 14.2
2749 Male, age 80, left hemisphere 30.5
2527 Male, age 74, both hemispheres 19.8
2082 Female, age 91, right hemisphere 15.1
1873 Female, age 85, both hemispheres 5.8
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 10.9
1963 Male, age 80, left hemisphere 17.1
2249 Male, age 74, both hemispheres 13.0
2113 Female, age 91, right hemisphere 11.8
2437 Female, age 94, left hemisphere 10.2
1892 Male, age 76, both hemispheres 9.9
1940 Female, age 85, left hemisphere 3.2
Hippocampus, CA3
nTPM: 10.0
2137 Male, age 80, left hemisphere 26.5
2861 Female, age 67, both hemispheres 12.3
1867 Male, age 76, both hemispheres 8.5
2436 Male, age 74, both hemispheres 6.9
1891 Female, age 85, both hemispheres 4.2
2620 Female, age 94, left hemisphere 1.6
Parahippocampal cortex
nTPM: 10.7
2245 Female, age 91, both hemispheres 23.6
2250 Female, age 67, right hemisphere 19.8
1990 Female, age 91, right hemisphere 11.2
2622 Female, age 67, right hemisphere 9.9
1933 Female, age 85, both hemispheres 9.8
2692 Male, age 74, both hemispheres 9.4
2018 Male, age 76, both hemispheres 6.9
2693 Female, age 94, both hemispheres 6.2
1850 Male, age 80, both hemispheres 5.4
2532 Female, age 72, left hemisphere 4.6
Perirhinal gyrus
nTPM: 11.7
1847 Female, age 91, left hemisphere 21.7
2521 Female, age 94, right hemisphere 15.4
1794 Male, age 80, right hemisphere 9.5
2848 Male, age 76, right hemisphere 6.8
1841 Female, age 85, right hemisphere 5.3
Subiculum
nTPM: 7.9
2619 Male, age 74, both hemispheres 12.1
1977 Female, age 85, both hemispheres 11.3
1901 Male, age 80, both hemispheres 10.2
2438 Female, age 94, left hemisphere 6.5
2042 Male, age 76, both hemispheres 6.1
2729 Female, age 91, right hemisphere 1.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.4
Samples: 197

Max nTPM: 103.9
Min nTPM: 0.5
Std nTPM: 23.0
Median nTPM: 27.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 103.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 102.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 102.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 101.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 96.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 86.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 85.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 83.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 80.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 78.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 77.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.3
FF:10153-102I9 76 years, female 40.1
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 13.3
Min nTPM: 9.3
Sample A Female 9.3
Sample B Female 13.3
Sample C Male 9.7
Sample D Male 9.3
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 18.7
Min nTPM: 11.9
Sample A Female 17.9
Sample B Female 11.9
Sample C Male 18.7
Sample D Male 13.6
Subiculum
nTPM: 17.2
Samples: 4

Max nTPM: 22.9
Min nTPM: 13.7
Sample A Female 22.9
Sample B Female 15.2
Sample C Male 17.1
Sample D Male 13.7
Ventral hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 19.0
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 10.7
Sample C Male 19.0
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.3
Min nTPM: 18.4
Sample A Male 20.3
Sample B Male 18.4
Sample C Female 21.5
Sample D Female 22.3
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.4
Sample A Male 13.5
Sample B Male 12.1
Sample C Female 8.4
Sample D Female 13.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
73925724 Antisense, RP_051214_03_B11, Mouse strain C57BL/6J (56 days, male) 6.0
69528106 Antisense, RP_050421_03_B04, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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