HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.8 nTPM
HPA:70.8 nTPM
GTEx:204.9 nTPM
FANTOM5:19.6 Scaled Tags Per Million
Pig:45.6 nTPM
Mouse:99.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043270Antibody HPA047226
Glial cells Not detectedNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.8
Sample id Sample description nTPM
Hippocampus
nTPM: 70.8
2621 Female, age 67, right hemisphere 88.8
2529 Female, age 94, left hemisphere 84.5
1911 Female, age 85, right hemisphere 69.9
2148 Female, age 91, left hemisphere 66.7
1898 Male, age 80, left hemisphere 63.8
1855 Male, age 76, left hemisphere 51.0
Dentate gyrus
nTPM: 62.5
2531 Female, age 67, both hemispheres 79.4
2530 Female, age 94, left hemisphere 76.0
1927 Female, age 91, both hemispheres 74.5
2528 Male, age 74, both hemispheres 53.2
2010 Male, age 76, both hemispheres 47.2
2246 Female, age 85, both hemispheres 44.6
Entorhinal gyrus
nTPM: 51.4
2613 Female, age 94, left hemisphere 55.7
2117 Female, age 91, right hemisphere 54.4
2686 Male, age 75, right hemisphere 53.7
2764 Male, age 80, right hemisphere 52.1
1787 Male, age 76, left hemisphere 47.4
1938 Female, age 85, left hemisphere 44.8
Hippocampus, CA1
nTPM: 56.4
2749 Male, age 80, left hemisphere 76.2
2527 Male, age 74, both hemispheres 69.9
1873 Female, age 85, both hemispheres 53.7
2082 Female, age 91, right hemisphere 43.3
2045 Male, age 76, both hemispheres 38.9
Hippocampus, CA2
nTPM: 61.5
1963 Male, age 80, left hemisphere 118.4
2437 Female, age 94, left hemisphere 65.3
2113 Female, age 91, right hemisphere 52.9
1892 Male, age 76, both hemispheres 48.5
2249 Male, age 74, both hemispheres 47.4
1940 Female, age 85, left hemisphere 36.5
Hippocampus, CA3
nTPM: 62.5
2861 Female, age 67, both hemispheres 96.2
2137 Male, age 80, left hemisphere 77.6
2620 Female, age 94, left hemisphere 61.4
1867 Male, age 76, both hemispheres 51.9
1891 Female, age 85, both hemispheres 44.7
2436 Male, age 74, both hemispheres 43.1
Parahippocampal cortex
nTPM: 45.7
2245 Female, age 91, both hemispheres 71.4
2622 Female, age 67, right hemisphere 49.1
2018 Male, age 76, both hemispheres 47.0
2250 Female, age 67, right hemisphere 44.2
2532 Female, age 72, left hemisphere 43.4
2692 Male, age 74, both hemispheres 43.4
1990 Female, age 91, right hemisphere 42.7
2693 Female, age 94, both hemispheres 42.1
1933 Female, age 85, both hemispheres 39.8
1850 Male, age 80, both hemispheres 33.7
Perirhinal gyrus
nTPM: 40.6
2521 Female, age 94, right hemisphere 44.4
1847 Female, age 91, left hemisphere 43.8
1794 Male, age 80, right hemisphere 43.2
1841 Female, age 85, right hemisphere 37.6
2848 Male, age 76, right hemisphere 33.9
Subiculum
nTPM: 47.5
2042 Male, age 76, both hemispheres 52.6
1901 Male, age 80, both hemispheres 50.0
1977 Female, age 85, both hemispheres 47.7
2619 Male, age 74, both hemispheres 46.6
2729 Female, age 91, right hemisphere 45.4
2438 Female, age 94, left hemisphere 42.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 204.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 204.9
Samples: 197

Max nTPM: 560.4
Min nTPM: 39.2
Std nTPM: 91.0
Median nTPM: 185.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 560.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 520.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 462.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 446.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 445.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 441.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 404.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 401.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 382.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 382.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 375.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.6
FF:10169-103B7 60 years, female 21.9
FF:10153-102I9 76 years, female 17.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.9
Samples: 4

Max nTPM: 55.3
Min nTPM: 31.5
Sample A Female 55.3
Sample B Female 44.2
Sample C Male 44.6
Sample D Male 31.5
Entorhinal cortex
nTPM: 45.6
Samples: 4

Max nTPM: 56.5
Min nTPM: 36.8
Sample A Female 42.4
Sample B Female 46.8
Sample C Male 56.5
Sample D Male 36.8
Subiculum
nTPM: 40.2
Samples: 4

Max nTPM: 53.1
Min nTPM: 33.0
Sample A Female 53.1
Sample B Female 39.1
Sample C Male 35.7
Sample D Male 33.0
Ventral hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 51.5
Min nTPM: 33.2
Sample A Female 38.3
Sample B Female 33.2
Sample C Male 51.5
Sample D Male 44.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.0
Samples: 4

Max nTPM: 106.6
Min nTPM: 92.5
Sample A Male 99.1
Sample B Male 106.6
Sample C Female 92.5
Sample D Female 97.6
Hippocampal formation
nTPM: 89.8
Samples: 4

Max nTPM: 99.0
Min nTPM: 83.1
Sample A Male 89.5
Sample B Male 83.1
Sample C Female 87.7
Sample D Female 99.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69549674 Antisense, RP_050317_04_E11, Mouse strain C57BL/6J (56 days, male) 0.2

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