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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:234.5 nTPM
FANTOM5:290.9 Scaled Tags Per Million
Pig:100.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055312Antibody CAB047343Antibody CAB069914
Glial cells Not detectedNot detectedLow
Neuronal cells MediumMediumMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 234.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 234.5
Samples: 246

Max nTPM: 568.7
Min nTPM: 78.1
Std nTPM: 90.6
Median nTPM: 222.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 568.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 554.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 550.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 514.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 496.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 496.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 445.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 435.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 432.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 429.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 427.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 413.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 410.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 401.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 397.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 388.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 385.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 385.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 378.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 377.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 375.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 372.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 366.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 365.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 364.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 358.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 343.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 341.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 341.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 341.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 337.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 335.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 333.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 330.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 330.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 330.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 329.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 325.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 322.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 321.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 319.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 314.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 314.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 312.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 309.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 298.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 293.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 292.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 292.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 291.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 291.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 290.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 289.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 289.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 289.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 287.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 287.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 285.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 282.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 282.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 278.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 277.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 271.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 271.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 270.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 270.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 269.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 268.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 267.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 266.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 266.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 266.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 266.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 266.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 265.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 264.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 264.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 263.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 261.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 259.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 256.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 256.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 254.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 252.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 251.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 250.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 250.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 249.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 249.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 247.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 246.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 245.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 245.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 244.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 244.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 243.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 243.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 243.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 242.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 241.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 239.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 239.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 238.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 238.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 236.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 234.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 234.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 234.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 232.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 230.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 230.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 229.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 229.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 228.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 228.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 227.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 227.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 227.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 226.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 226.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 224.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 223.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 222.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 222.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 222.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 221.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 221.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 220.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 218.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 217.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 217.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 215.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 215.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 214.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 214.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 211.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 211.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 209.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 208.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 208.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 208.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 207.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 207.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 206.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 206.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 203.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 200.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 199.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 195.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 194.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 193.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 193.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 192.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 192.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 192.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 191.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 190.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 189.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 188.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 187.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 186.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 183.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 183.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 183.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 182.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 182.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 180.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 179.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 179.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 178.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 177.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 174.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 174.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 173.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 172.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 171.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 171.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 170.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 170.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 169.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 168.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 168.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 167.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 166.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 165.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 165.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 165.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 164.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 163.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 162.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 161.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 160.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 159.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 158.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 158.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 157.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 157.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 156.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 155.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 155.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 155.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 155.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 154.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 152.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 152.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 151.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 149.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 147.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 147.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 145.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 145.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 144.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 144.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 143.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 143.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 142.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 142.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 141.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 139.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 139.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 137.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 136.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 135.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 134.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 133.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 133.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 132.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 130.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 130.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 122.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 120.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 118.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 118.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 118.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 117.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 116.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 113.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 111.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 111.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 110.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 106.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 103.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 99.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 99.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 78.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 290.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 290.9
FF:10164-103B2 76 years, female 290.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 100.5
Pig sample Sample description nTPM
Caudate
nTPM: 100.5
Samples: 4

Max nTPM: 105.4
Min nTPM: 96.8
Sample A Female 101.6
Sample B Female 96.8
Sample C Male 98.2
Sample D Male 105.4

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