PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.2 nTPM
HPA:24.2 nTPM
FANTOM5:160.3 Scaled Tags Per Million
Pig:15.0 nTPM
Mouse:12.5 nTPM
Allen mouse:1.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 24.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 22.2
2188 Female, age 91, both hemispheres 23.7
1984 Male, age 76, both hemispheres 22.1
2301 Female, age 85, both hemispheres 21.9
2090 Male, age 80, both hemispheres 21.4
Area postrema
nTPM: 21.4
2306 Male, age 80, both hemispheres 24.6
2054 Male, age 76, both hemispheres 20.0
2799 Male, age 61, both hemispheres 19.5
Cuneate nuclei
nTPM: 21.9
2381 Male, age 80, both hemispheres 24.7
2131 Male, age 76, both hemispheres 21.5
2376 Male, age 61, both hemispheres 19.4
Dorsal cochlear nucleus
nTPM: 20.3
2187 Female, age 91, both hemispheres 20.9
2378 Male, age 80, both hemispheres 20.9
2370 Male, age 61, both hemispheres 20.3
2802 Male, age 74, right hemisphere 19.8
2058 Male, age 76, both hemispheres 19.5
Dorsal medullary reticular nucleus
nTPM: 19.1
2373 Male, age 61, both hemispheres 21.0
2088 Male, age 76, both hemispheres 19.8
2040 Female, age 85, both hemispheres 16.4
Dorsal motor vagal complex
nTPM: 22.6
2185 Male, age 76, both hemispheres 28.0
2643 Male, age 74, both hemispheres 26.2
2813 Female, age 72, unknown 26.1
2807 Female, age 85, both hemispheres 24.6
2797 Male, age 61, both hemispheres 20.1
2844 Male, age 55, unknown 19.9
2133 Female, age 91, both hemispheres 18.3
2000 Male, age 74, unknown 17.4
Dorsal tegmental nucleus
nTPM: 21.7
2358 Male, age 61, both hemispheres 25.1
2083 Male, age 80, both hemispheres 22.1
1936 Male, age 76, left hemisphere 20.9
2326 Male, age 74, both hemispheres 18.6
Dorsolateral tegmental area
nTPM: 20.2
2141 Male, age 76, both hemispheres 24.5
2337 Male, age 61, both hemispheres 21.9
2654 Male, age 80, both hemispheres 19.7
2751 Female, age 85, both hemispheres 18.2
2360 Male, age 74, both hemispheres 16.8
Gigantocellular reticular nuclei, medullary
nTPM: 19.6
2314 Male, age 61, both hemispheres 21.7
2387 Female, age 91, both hemispheres 20.8
2310 Male, age 80, both hemispheres 19.9
2022 Male, age 76, right hemisphere 19.2
1876 Female, age 85, both hemispheres 18.4
2462 Male, age 74, both hemispheres 17.2
Gigantocellular reticular nuclei, pars
nTPM: 23.1
2330 Male, age 80, both hemispheres 26.6
2706 Male, age 80, both hemispheres 25.4
2336 Male, age 61, both hemispheres 22.7
2168 Male, age 76, both hemispheres 20.4
2084 Female, age 85, both hemispheres 20.2
Inferior olive
nTPM: 24.2
2628 Female, age 91, both hemispheres 32.3
2379 Male, age 80, both hemispheres 24.5
2563 Male, age 74, both hemispheres 22.7
2085 Female, age 85, both hemispheres 22.2
2178 Male, age 61, both hemispheres 19.3
Kolliker-Fuse nucleus
nTPM: 23.1
2793 Female, age 91, left hemisphere 27.3
2163 Male, age 80, both hemispheres 21.5
2315 Male, age 76, right hemisphere 20.4
Lateral lemniscal nuclei
nTPM: 18.7
2320 Female, age 91, left hemisphere 22.1
2453 Male, age 74, right hemisphere 21.3
2169 Male, age 76, both hemispheres 20.5
2746 Female, age 85, left hemisphere 17.9
2036 Male, age 80, both hemispheres 11.7
Lateral medullary reticular nucleus
nTPM: 20.9
2374 Male, age 61, both hemispheres 26.3
2804 Female, age 91, both hemispheres 24.2
2190 Female, age 85, both hemispheres 21.1
2044 Male, age 76, both hemispheres 18.5
2852 Male, age 80, both hemispheres 18.5
2305 Male, age 74, both hemispheres 16.9
Lateral parabrachial nucleus
nTPM: 19.4
2792 Male, age 76, both hemispheres 22.7
2139 Female, age 85, right hemisphere 19.5
2013 Male, age 80, both hemispheres 17.7
2790 Male, age 61, both hemispheres 17.6
Lateral vestibular nucleus
nTPM: 21.9
2184 Male, age 76, both hemispheres 22.5
2311 Male, age 80, both hemispheres 21.3
Locus coeruleus
nTPM: 18.5
2720 Male, age 74, both hemispheres 23.5
2788 Male, age 74, unknown 19.2
2162 Male, age 80, both hemispheres 18.8
1980 Male, age 76, both hemispheres 18.5
2123 Female, age 91, both hemispheres 16.9
2317 Female, age 72, unknown 16.3
2014 Male, age 55, unknown 16.1
Medial olivary nucleus
nTPM: 21.7
2851 Male, age 80, both hemispheres 28.1
2138 Female, age 91, both hemispheres 22.2
1962 Male, age 76, both hemispheres 19.0
1943 Male, age 61, both hemispheres 17.7
Medial parabrachial nucleus
nTPM: 22.0
2854 Male, age 80, both hemispheres 24.8
2786 Male, age 76, both hemispheres 24.6
2156 Male, age 61, both hemispheres 22.4
2170 Female, age 91, both hemispheres 20.6
2463 Female, age 85, right hemisphere 17.5
Medial periolivary nuclei
nTPM: 19.5
2458 Female, age 91, both hemispheres 25.7
2081 Male, age 80, both hemispheres 20.8
2171 Female, age 85, both hemispheres 20.1
2063 Male, age 76, both hemispheres 15.8
2791 Male, age 74, right hemisphere 15.1
Medial vestibular nucleus
nTPM: 20.6
2624 Male, age 61, both hemispheres 22.6
2803 Female, age 91, both hemispheres 21.7
2801 Male, age 74, both hemispheres 21.3
2134 Male, age 76, both hemispheres 20.6
2093 Male, age 80, both hemispheres 20.3
2743 Female, age 85, both hemispheres 17.3
Motor facial nucleus
nTPM: 21.3
2697 Female, age 85, both hemispheres 26.6
2795 Female, age 91, both hemispheres 24.6
2327 Male, age 80, both hemispheres 22.5
2365 Male, age 74, right hemisphere 20.0
2126 Male, age 61, both hemispheres 17.6
2062 Male, age 76, both hemispheres 16.3
Motor hypoglossal nucleus
nTPM: 21.1
2461 Male, age 61, both hemispheres 28.2
2182 Male, age 80, both hemispheres 21.4
2277 Male, age 76, both hemispheres 19.2
2132 Female, age 85, both hemispheres 18.7
2125 Female, age 91, both hemispheres 18.2
Motor trigeminal nucleus
nTPM: 21.8
2321 Female, age 91, both hemispheres 24.8
2309 Male, age 76, both hemispheres 22.7
2335 Male, age 61, both hemispheres 21.8
2079 Male, age 80, both hemispheres 21.7
2560 Male, age 74, both hemispheres 17.8
Nuclei of the trapezoid body
nTPM: 19.0
2166 Male, age 80, both hemispheres 22.2
2368 Female, age 91, both hemispheres 21.4
2159 Male, age 61, both hemispheres 18.0
1983 Male, age 76, both hemispheres 17.0
2735 Female, age 85, both hemispheres 16.4
Nucleus ambiguus
nTPM: 19.6
2096 Female, age 85, both hemispheres 20.1
2071 Male, age 76, both hemispheres 19.2
Nucleus cuneatus
nTPM: 22.8
2805 Female, age 91, both hemispheres 30.2
2808 Female, age 85, both hemispheres 23.3
2100 Male, age 76, both hemispheres 23.0
2380 Male, age 80, both hemispheres 20.8
2564 Male, age 74, both hemispheres 19.8
2562 Male, age 61, both hemispheres 19.4
Nucleus gracilis
nTPM: 23.6
2627 Male, age 74, both hemispheres 24.3
2382 Male, age 80, both hemispheres 24.1
2299 Female, age 85, both hemispheres 22.3
Nucleus raphe magnus
nTPM: 20.5
2328 Male, age 80, both hemispheres 22.5
2172 Female, age 85, both hemispheres 22.1
2459 Female, age 91, both hemispheres 21.9
2051 Male, age 76, both hemispheres 19.0
2455 Male, age 74, both hemispheres 18.9
2160 Male, age 61, both hemispheres 18.6
Nucleus raphe obscurus
nTPM: 20.6
2142 Male, age 76, midline 22.5
2800 Male, age 61, midline 19.8
2845 Female, age 85, midline 19.3
Nucleus raphe pallidus
nTPM: 19.0
2183 Male, age 80, midline 21.1
2145 Male, age 76, midline 20.4
1924 Male, age 61, midline 15.7
Nucleus tractus solitarii
nTPM: 20.0
2307 Male, age 80, both hemispheres 24.0
2191 Female, age 85, both hemispheres 21.4
2656 Male, age 76, both hemispheres 20.6
2144 Female, age 91, right hemisphere 13.8
Paramedian reticular nucleus
nTPM: 18.2
2052 Male, age 76, both hemispheres 20.2
2050 Female, age 85, both hemispheres 17.8
2057 Male, age 80, both hemispheres 17.5
2313 Male, age 61, both hemispheres 17.4
Parvicellular reticular nuclei
nTPM: 20.4
2095 Male, age 76, both hemispheres 21.5
2119 Male, age 80, both hemispheres 20.6
2558 Male, age 74, both hemispheres 19.1
Parvicellular reticular nuclei, medullary
nTPM: 21.7
2181 Male, age 80, left hemisphere 23.7
2189 Female, age 91, both hemispheres 21.7
2091 Female, age 85, both hemispheres 19.8
Peritrigeminal nucleus
nTPM: 18.9
2136 Male, age 76, both hemispheres 20.8
2179 Male, age 61, both hemispheres 18.1
2067 Female, age 85, both hemispheres 17.7
Pontine nuclei
nTPM: 18.8
2787 Female, age 85, both hemispheres 23.4
2319 Female, age 91, both hemispheres 22.0
2115 Male, age 80, left hemisphere 20.7
1863 Male, age 55, unknown 18.2
1968 Male, age 76, left hemisphere 18.2
2454 Male, age 74, left hemisphere 17.2
2109 Female, age 72, unknown 16.2
2727 Male, age 61, right hemisphere 14.7
Pontine raphe nucleus
nTPM: 19.7
2853 Male, age 76, midline 20.9
2122 Female, age 85, midline 18.5
Posteroventral cochlear nucleus
nTPM: 20.7
2135 Female, age 91, both hemispheres 23.1
2070 Male, age 76, both hemispheres 21.3
2341 Male, age 80, both hemispheres 20.8
2371 Male, age 61, both hemispheres 20.2
2752 Female, age 85, both hemispheres 18.2
Prepositus hypoglossal nucleus
nTPM: 19.4
2086 Male, age 80, both hemispheres 20.5
2855 Female, age 85, right hemisphere 18.2
Principal sensory trigeminal nucleus
nTPM: 21.0
2367 Female, age 91, left hemisphere 24.9
2324 Male, age 76, both hemispheres 23.7
2158 Male, age 61, both hemispheres 18.3
2008 Male, age 80, left hemisphere 17.0
Reticular pontine nucleus, caudal
nTPM: 21.4
2457 Female, age 91, both hemispheres 24.8
2332 Male, age 80, right hemisphere 22.9
2092 Male, age 76, both hemispheres 20.2
2559 Male, age 74, both hemispheres 17.8
Reticular pontine nucleus, oral
nTPM: 21.8
2366 Female, age 91, both hemispheres 29.4
2167 Male, age 76, both hemispheres 23.5
1939 Male, age 80, both hemispheres 20.2
2012 Female, age 85, both hemispheres 17.9
2361 Male, age 74, both hemispheres 17.9
Reticulotegmental nucleus
nTPM: 22.3
2322 Female, age 91, both hemispheres 24.9
2333 Male, age 80, both hemispheres 24.2
2325 Male, age 76, both hemispheres 20.7
2452 Male, age 74, both hemispheres 19.3
Spinal trigeminal nucleus, caudal
nTPM: 21.3
2642 Male, age 74, both hemispheres 25.9
2308 Male, age 80, both hemispheres 20.8
2312 Male, age 61, both hemispheres 20.1
2390 Female, age 91, both hemispheres 19.9
2447 Male, age 76, both hemispheres 19.8
Spinal trigeminal nucleus, interpolar
nTPM: 19.5
2389 Female, age 91, both hemispheres 23.7
2625 Male, age 61, both hemispheres 22.5
2066 Male, age 76, right hemisphere 18.2
2386 Female, age 85, both hemispheres 17.2
2033 Male, age 80, both hemispheres 16.0
Spinal trigeminal nucleus, oral
nTPM: 21.3
2164 Male, age 80, both hemispheres 23.7
1978 Male, age 76, both hemispheres 21.1
2737 Female, age 85, both hemispheres 19.2
Spinal vestibular nucleus
nTPM: 20.0
2796 Male, age 61, both hemispheres 23.6
2748 Male, age 76, both hemispheres 20.4
2806 Female, age 85, both hemispheres 20.1
2186 Female, age 91, both hemispheres 19.8
2780 Male, age 80, both hemispheres 19.0
2384 Male, age 74, both hemispheres 17.4
Subcoeruleus area
nTPM: 20.2
2089 Male, age 76, left hemisphere 21.9
2323 Female, age 91, left hemisphere 20.9
1958 Male, age 80, both hemispheres 20.8
2451 Male, age 74, both hemispheres 18.9
2369 Female, age 85, left hemisphere 18.3
Superior olive
nTPM: 19.4
2561 Female, age 91, both hemispheres 22.9
2329 Male, age 80, right hemisphere 21.9
1875 Female, age 85, both hemispheres 18.2
2364 Male, age 74, right hemisphere 17.3
2020 Male, age 76, both hemispheres 16.9
Superior vestibular nucleus
nTPM: 19.8
2061 Male, age 76, both hemispheres 22.0
2383 Male, age 74, both hemispheres 19.9
2015 Male, age 80, both hemispheres 17.4
Ventral medullary reticular nucleus
nTPM: 19.3
2060 Male, age 76, both hemispheres 20.6
2372 Male, age 61, both hemispheres 18.0
Ventral periolivary nuclei
nTPM: 19.7
2165 Male, age 80, both hemispheres 21.9
2794 Female, age 91, left hemisphere 21.3
2130 Female, age 85, both hemispheres 18.9
2023 Male, age 76, both hemispheres 16.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 20.0
2302 Female, age 91, both hemispheres 21.6
2180 Male, age 61, both hemispheres 20.7
1986 Male, age 76, both hemispheres 20.3
2118 Male, age 80, both hemispheres 20.0
2741 Female, age 85, both hemispheres 17.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 21.2
2840 Female, age 85, both hemispheres 24.1
2456 Female, age 91, both hemispheres 22.2
2359 Male, age 61, both hemispheres 20.9
2161 Male, age 80, both hemispheres 20.5
2449 Male, age 74, both hemispheres 20.1
1959 Male, age 76, both hemispheres 19.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 160.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 160.3
FF:10182-103D2 60 years, female 187.8
FF:10165-103B3 76 years, female 132.8
Medulla oblongata
Scaled Tags Per Million: 158.2
FF:10174-103C3 60 years, female 190.2
FF:10038-101F2 18-64 years, mixed 144.4
FF:10155-103A2 76 years, female 140.0
Pons
Scaled Tags Per Million: 103.2
FF:10033-101E6 18-54 years, mixed 103.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 15.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 15.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.1
Sample A Female 15.8
Sample B Female 14.9
Sample C Male 16.1
Sample D Male 13.1
Pons
nTPM: 14.7
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.8
Sample A Female 13.8
Sample B Female 15.1
Sample C Male 14.9
Sample D Male 14.8

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 12.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 12.5
Samples: 4

Max nTPM: 14.1
Min nTPM: 11.3
Sample A Male 14.1
Sample B Male 11.3
Sample C Female 13.2
Sample D Female 11.5

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.2
69816822 Antisense, RP_050510_01_H11, Mouse strain C57BL/6J (56 days, male) 1.2
Pons
Expression energy: 0.9
69816822 Antisense, RP_050510_01_H11, Mouse strain C57BL/6J (56 days, male) 0.9

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