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RPL36
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:633.1 nTPM
HPA:633.1 nTPM
GTEx:1005.4 nTPM
FANTOM5:224.5 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:672.8 nTPM
Allen mouse:25.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 633.1
Sample id Sample description nTPM
Amygdala
nTPM: 633.1
2695 Female, age 67, right hemisphere 674.5
2514 Male, age 75, right hemisphere 642.9
2517 Female, age 94, left hemisphere 622.9
1987 Female, age 91, left hemisphere 617.3
2814 Male, age 76, right hemisphere 608.1
Basal amygdala
nTPM: 616.0
2827 Female, age 67, right hemisphere 646.8
2609 Male, age 75, right hemisphere 626.7
2685 Female, age 94, left hemisphere 620.3
2110 Male, age 80, left hemisphere 607.1
2243 Female, age 91, right hemisphere 600.1
1955 Male, age 76, both hemispheres 595.0
Central amygdala
nTPM: 623.1
2826 Female, age 94, left hemisphere 689.0
2515 Male, age 75, right hemisphere 626.3
2239 Male, age 80, left hemisphere 602.5
2701 Female, age 91, right hemisphere 600.0
1905 Male, age 76, both hemispheres 597.6
Corticomedial amygdala
nTPM: 611.6
2829 Male, age 80, left hemisphere 631.3
2428 Male, age 75, right hemisphere 617.5
2429 Female, age 94, left hemisphere 616.4
2535 Female, age 67, right hemisphere 608.5
2242 Female, age 91, right hemisphere 607.2
2240 Male, age 76, both hemispheres 588.8
Lateral amygdala
nTPM: 624.0
2830 Female, age 67, right hemisphere 683.1
2516 Male, age 75, right hemisphere 637.9
2534 Female, age 94, left hemisphere 634.3
2256 Male, age 80, left hemisphere 601.0
2255 Female, age 91, right hemisphere 597.7
1883 Male, age 76, both hemispheres 590.1
Stria terminalis, bed nucleus
nTPM: 588.6
1974 Female, age 91, both hemispheres 609.8
2201 Male, age 74, unknown 590.8
2486 Female, age 94, both hemispheres 565.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1005.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1005.4
Samples: 152

Max nTPM: 3256.0
Min nTPM: 421.6
Std nTPM: 468.8
Median nTPM: 923.3
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3256.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3176.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2753.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2445.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 2155.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 2097.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1833.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 1785.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1703.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1687.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1671.8
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1645.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1630.2
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1605.0
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1602.4
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1574.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1514.3
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1486.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1467.7
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1463.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1458.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1450.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1358.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1345.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1334.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1316.8
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1308.2
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1286.9
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1267.9
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1258.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1241.2
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1233.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1230.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1221.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1190.0
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1187.4
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1184.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1170.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1140.8
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1136.4
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1135.9
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1106.3
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1097.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1097.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1085.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1082.2
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1075.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1073.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1066.7
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1057.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1053.3
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1048.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1036.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1035.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1030.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1023.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1019.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1012.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1000.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 993.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 990.8
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 988.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 982.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 970.5
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 969.2
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 967.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 964.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 963.9
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 959.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 959.5
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 950.6
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 945.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 944.6
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 939.7
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 936.8
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 935.7
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 910.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 907.8
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 906.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 898.0
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 896.5
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 893.7
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 885.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 877.0
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 862.7
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 861.8
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 857.5
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 856.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 853.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 848.9
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 842.9
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 831.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 829.9
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 820.0
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 807.4
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 794.3
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 784.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 775.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 767.7
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 765.6
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 763.6
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 751.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 747.3
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 741.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 733.6
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 730.4
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 719.4
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 713.3
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 709.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 704.4
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 703.4
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 698.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 693.5
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 693.0
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 690.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 690.3
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 689.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 688.7
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 683.8
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 674.7
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 668.1
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 651.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 641.6
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 633.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 630.8
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 618.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 617.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 606.5
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 604.7
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 601.4
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 597.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 595.7
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 590.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 587.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 582.5
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 559.0
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 556.2
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 554.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 552.8
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 549.4
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 543.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 537.8
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 536.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 527.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 502.0
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 483.8
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 478.5
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 471.1
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 470.8
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 466.0
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 446.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 421.6
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 224.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 224.5
FF:10151-102I7 76 years, female 224.5

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.0
Pig sample Sample description nTPM
Amygdala
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 672.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 672.8
Samples: 4

Max nTPM: 804.3
Min nTPM: 606.1
Sample A Male 606.1
Sample B Male 638.6
Sample C Female 804.3
Sample D Female 642.3

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 25.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 25.6
68410536 Antisense, RP_041214_02_B01, Mouse strain C57BL/6J (56 days, male) 25.6

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