HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.7 nTPM
HPA:41.7 nTPM
GTEx:47.4 nTPM
FANTOM5:198.4 Scaled Tags Per Million
Pig:54.2 nTPM
Mouse:38.5 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067045Antibody CAB070846
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.7
Sample id Sample description nTPM
Hippocampus
nTPM: 37.8
1898 Male, age 80, left hemisphere 46.8
1855 Male, age 76, left hemisphere 39.2
2621 Female, age 67, right hemisphere 36.5
2529 Female, age 94, left hemisphere 35.3
2148 Female, age 91, left hemisphere 35.2
1911 Female, age 85, right hemisphere 33.8
Dentate gyrus
nTPM: 38.0
2010 Male, age 76, both hemispheres 43.7
1927 Female, age 91, both hemispheres 39.7
2531 Female, age 67, both hemispheres 38.2
2528 Male, age 74, both hemispheres 35.7
2246 Female, age 85, both hemispheres 35.5
2530 Female, age 94, left hemisphere 35.1
Entorhinal gyrus
nTPM: 38.4
2764 Male, age 80, right hemisphere 42.2
2613 Female, age 94, left hemisphere 41.1
2686 Male, age 75, right hemisphere 40.0
1938 Female, age 85, left hemisphere 38.7
1787 Male, age 76, left hemisphere 36.3
2117 Female, age 91, right hemisphere 31.8
Hippocampus, CA1
nTPM: 41.7
2749 Male, age 80, left hemisphere 55.0
1873 Female, age 85, both hemispheres 40.5
2527 Male, age 74, both hemispheres 39.4
2082 Female, age 91, right hemisphere 37.0
2045 Male, age 76, both hemispheres 36.6
Hippocampus, CA2
nTPM: 39.0
1892 Male, age 76, both hemispheres 48.6
1963 Male, age 80, left hemisphere 45.7
2249 Male, age 74, both hemispheres 36.6
2113 Female, age 91, right hemisphere 36.5
2437 Female, age 94, left hemisphere 33.6
1940 Female, age 85, left hemisphere 33.1
Hippocampus, CA3
nTPM: 39.7
2137 Male, age 80, left hemisphere 45.6
1867 Male, age 76, both hemispheres 44.4
2620 Female, age 94, left hemisphere 40.9
2436 Male, age 74, both hemispheres 37.4
1891 Female, age 85, both hemispheres 34.9
2861 Female, age 67, both hemispheres 34.6
Parahippocampal cortex
nTPM: 38.3
1850 Male, age 80, both hemispheres 44.2
2018 Male, age 76, both hemispheres 39.0
2693 Female, age 94, both hemispheres 38.9
1933 Female, age 85, both hemispheres 38.6
2245 Female, age 91, both hemispheres 38.5
2622 Female, age 67, right hemisphere 38.4
2692 Male, age 74, both hemispheres 37.5
1990 Female, age 91, right hemisphere 36.3
2532 Female, age 72, left hemisphere 36.3
2250 Female, age 67, right hemisphere 35.5
Perirhinal gyrus
nTPM: 41.4
1847 Female, age 91, left hemisphere 50.6
1794 Male, age 80, right hemisphere 44.4
1841 Female, age 85, right hemisphere 39.0
2848 Male, age 76, right hemisphere 37.5
2521 Female, age 94, right hemisphere 35.4
Subiculum
nTPM: 35.7
1901 Male, age 80, both hemispheres 38.9
1977 Female, age 85, both hemispheres 36.4
2619 Male, age 74, both hemispheres 36.2
2042 Male, age 76, both hemispheres 35.8
2438 Female, age 94, left hemisphere 33.9
2729 Female, age 91, right hemisphere 33.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.4
Samples: 197

Max nTPM: 97.8
Min nTPM: 15.4
Std nTPM: 17.1
Median nTPM: 44.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 97.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 95.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 94.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 93.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 92.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 86.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 85.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 84.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 84.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 81.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 81.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 198.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 198.4
FF:10169-103B7 60 years, female 278.3
FF:10153-102I9 76 years, female 118.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 75.9
Min nTPM: 37.4
Sample A Female 75.9
Sample B Female 50.9
Sample C Male 52.8
Sample D Male 37.4
Entorhinal cortex
nTPM: 51.9
Samples: 4

Max nTPM: 60.6
Min nTPM: 41.4
Sample A Female 53.1
Sample B Female 60.6
Sample C Male 52.3
Sample D Male 41.4
Subiculum
nTPM: 48.2
Samples: 4

Max nTPM: 64.4
Min nTPM: 40.9
Sample A Female 64.4
Sample B Female 43.0
Sample C Male 44.6
Sample D Male 40.9
Ventral hippocampus
nTPM: 53.8
Samples: 4

Max nTPM: 68.2
Min nTPM: 37.1
Sample A Female 60.3
Sample B Female 37.1
Sample C Male 68.2
Sample D Male 49.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 44.7
Min nTPM: 34.6
Sample A Male 34.6
Sample B Male 44.7
Sample C Female 36.6
Sample D Female 37.5
Hippocampal formation
nTPM: 38.6
Samples: 4

Max nTPM: 45.4
Min nTPM: 33.4
Sample A Male 33.4
Sample B Male 41.4
Sample C Female 34.0
Sample D Female 45.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
67881785 Antisense, RP_040923_01_A03, Mouse strain C57BL/6J (56 days, male) 17.7
74658173 Antisense, RP_060220_02_D01, Mouse strain C57BL/6J (56 days, male) 13.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.