HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:102.8 nTPM
HPA:102.8 nTPM
GTEx:103.6 nTPM
FANTOM5:62.1 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:38.7 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040932
Glial cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.8
Sample id Sample description nTPM
Hippocampus
nTPM: 95.6
1898 Male, age 80, left hemisphere 105.0
1855 Male, age 76, left hemisphere 97.7
2621 Female, age 67, right hemisphere 94.9
2148 Female, age 91, left hemisphere 93.3
2529 Female, age 94, left hemisphere 93.1
1911 Female, age 85, right hemisphere 89.9
Dentate gyrus
nTPM: 95.6
2530 Female, age 94, left hemisphere 101.0
2010 Male, age 76, both hemispheres 99.2
1927 Female, age 91, both hemispheres 98.4
2246 Female, age 85, both hemispheres 94.0
2528 Male, age 74, both hemispheres 91.7
2531 Female, age 67, both hemispheres 89.2
Entorhinal gyrus
nTPM: 98.6
2764 Male, age 80, right hemisphere 104.1
1938 Female, age 85, left hemisphere 102.6
2613 Female, age 94, left hemisphere 99.7
1787 Male, age 76, left hemisphere 99.3
2117 Female, age 91, right hemisphere 95.5
2686 Male, age 75, right hemisphere 90.4
Hippocampus, CA1
nTPM: 97.9
2749 Male, age 80, left hemisphere 111.0
1873 Female, age 85, both hemispheres 98.3
2045 Male, age 76, both hemispheres 95.0
2527 Male, age 74, both hemispheres 93.9
2082 Female, age 91, right hemisphere 91.4
Hippocampus, CA2
nTPM: 97.7
1892 Male, age 76, both hemispheres 106.5
1963 Male, age 80, left hemisphere 105.9
2437 Female, age 94, left hemisphere 96.7
2249 Male, age 74, both hemispheres 95.1
1940 Female, age 85, left hemisphere 92.4
2113 Female, age 91, right hemisphere 89.8
Hippocampus, CA3
nTPM: 96.2
2137 Male, age 80, left hemisphere 100.5
2436 Male, age 74, both hemispheres 99.1
1867 Male, age 76, both hemispheres 97.8
2620 Female, age 94, left hemisphere 94.3
2861 Female, age 67, both hemispheres 93.8
1891 Female, age 85, both hemispheres 91.8
Parahippocampal cortex
nTPM: 96.0
1850 Male, age 80, both hemispheres 102.4
1933 Female, age 85, both hemispheres 101.3
1990 Female, age 91, right hemisphere 97.0
2692 Male, age 74, both hemispheres 96.5
2018 Male, age 76, both hemispheres 95.4
2245 Female, age 91, both hemispheres 95.4
2250 Female, age 67, right hemisphere 95.3
2532 Female, age 72, left hemisphere 94.4
2693 Female, age 94, both hemispheres 91.3
2622 Female, age 67, right hemisphere 91.2
Perirhinal gyrus
nTPM: 102.8
1847 Female, age 91, left hemisphere 110.6
1794 Male, age 80, right hemisphere 104.5
1841 Female, age 85, right hemisphere 101.8
2521 Female, age 94, right hemisphere 99.5
2848 Male, age 76, right hemisphere 97.8
Subiculum
nTPM: 93.0
1977 Female, age 85, both hemispheres 98.9
1901 Male, age 80, both hemispheres 97.4
2619 Male, age 74, both hemispheres 94.7
2042 Male, age 76, both hemispheres 90.0
2729 Female, age 91, right hemisphere 88.7
2438 Female, age 94, left hemisphere 88.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 103.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 103.6
Samples: 197

Max nTPM: 230.6
Min nTPM: 34.0
Std nTPM: 31.3
Median nTPM: 98.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 230.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 226.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 208.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 191.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 190.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 186.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 176.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 174.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 172.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 164.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 159.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.1
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 50.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 33.0
Min nTPM: 20.2
Sample A Female 33.0
Sample B Female 23.6
Sample C Male 26.0
Sample D Male 20.2
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 24.1
Min nTPM: 18.3
Sample A Female 24.1
Sample B Female 23.3
Sample C Male 22.6
Sample D Male 18.3
Subiculum
nTPM: 22.8
Samples: 4

Max nTPM: 29.1
Min nTPM: 19.9
Sample A Female 29.1
Sample B Female 19.9
Sample C Male 22.0
Sample D Male 20.1
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 30.2
Min nTPM: 18.4
Sample A Female 27.9
Sample B Female 18.4
Sample C Male 30.2
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 38.5
Min nTPM: 33.5
Sample A Male 35.4
Sample B Male 38.5
Sample C Female 36.4
Sample D Female 33.5
Hippocampal formation
nTPM: 38.7
Samples: 4

Max nTPM: 42.9
Min nTPM: 35.4
Sample A Male 42.9
Sample B Male 35.4
Sample C Female 38.7
Sample D Female 37.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
68637844 Antisense, RP_050126_01_G02, Mouse strain C57BL/6J (56 days, male) 4.4

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