HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:187.5 nTPM
HPA:187.5 nTPM
GTEx:176.9 nTPM
FANTOM5:164.5 Scaled Tags Per Million
Mouse:19.9 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063029Antibody CAB005268
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 187.5
Sample id Sample description nTPM
Hippocampus
nTPM: 158.9
2529 Female, age 94, left hemisphere 190.5
2621 Female, age 67, right hemisphere 167.8
2148 Female, age 91, left hemisphere 160.5
1911 Female, age 85, right hemisphere 151.8
1898 Male, age 80, left hemisphere 151.4
1855 Male, age 76, left hemisphere 131.2
Dentate gyrus
nTPM: 172.3
2531 Female, age 67, both hemispheres 209.0
2530 Female, age 94, left hemisphere 184.4
2010 Male, age 76, both hemispheres 176.7
2528 Male, age 74, both hemispheres 171.3
2246 Female, age 85, both hemispheres 150.7
1927 Female, age 91, both hemispheres 141.6
Entorhinal gyrus
nTPM: 187.5
2764 Male, age 80, right hemisphere 212.4
2117 Female, age 91, right hemisphere 199.4
2613 Female, age 94, left hemisphere 190.5
1787 Male, age 76, left hemisphere 184.0
2686 Male, age 75, right hemisphere 172.2
1938 Female, age 85, left hemisphere 166.3
Hippocampus, CA1
nTPM: 158.5
2749 Male, age 80, left hemisphere 206.4
2527 Male, age 74, both hemispheres 168.3
2082 Female, age 91, right hemisphere 155.6
2045 Male, age 76, both hemispheres 136.3
1873 Female, age 85, both hemispheres 126.2
Hippocampus, CA2
nTPM: 164.2
1963 Male, age 80, left hemisphere 181.5
1940 Female, age 85, left hemisphere 178.2
2249 Male, age 74, both hemispheres 170.8
2437 Female, age 94, left hemisphere 169.3
2113 Female, age 91, right hemisphere 162.9
1892 Male, age 76, both hemispheres 122.7
Hippocampus, CA3
nTPM: 170.0
2620 Female, age 94, left hemisphere 201.6
2861 Female, age 67, both hemispheres 189.9
2137 Male, age 80, left hemisphere 188.3
2436 Male, age 74, both hemispheres 157.9
1867 Male, age 76, both hemispheres 144.4
1891 Female, age 85, both hemispheres 137.6
Parahippocampal cortex
nTPM: 170.8
2532 Female, age 72, left hemisphere 201.6
2245 Female, age 91, both hemispheres 192.9
1990 Female, age 91, right hemisphere 187.9
2622 Female, age 67, right hemisphere 186.3
2018 Male, age 76, both hemispheres 167.6
2250 Female, age 67, right hemisphere 160.6
2692 Male, age 74, both hemispheres 158.1
1933 Female, age 85, both hemispheres 157.9
2693 Female, age 94, both hemispheres 149.4
1850 Male, age 80, both hemispheres 145.3
Perirhinal gyrus
nTPM: 166.1
1794 Male, age 80, right hemisphere 191.5
2521 Female, age 94, right hemisphere 182.6
1847 Female, age 91, left hemisphere 167.0
1841 Female, age 85, right hemisphere 150.6
2848 Male, age 76, right hemisphere 139.0
Subiculum
nTPM: 165.5
1977 Female, age 85, both hemispheres 199.6
2042 Male, age 76, both hemispheres 172.0
2619 Male, age 74, both hemispheres 165.7
1901 Male, age 80, both hemispheres 161.1
2729 Female, age 91, right hemisphere 149.6
2438 Female, age 94, left hemisphere 144.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 176.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 176.9
Samples: 197

Max nTPM: 484.4
Min nTPM: 41.0
Std nTPM: 62.0
Median nTPM: 170.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 484.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 400.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 372.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 365.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 345.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 340.6
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 331.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 323.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 310.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 291.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 275.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 164.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 164.5
FF:10153-102I9 76 years, female 173.2
FF:10169-103B7 60 years, female 155.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 25.7
Min nTPM: 14.7
Sample A Male 22.4
Sample B Male 25.7
Sample C Female 14.7
Sample D Female 17.1
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 18.0
Min nTPM: 12.5
Sample A Male 12.5
Sample B Male 16.8
Sample C Female 12.7
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
606 Antisense, RP_040507_01_C09, Mouse strain C57BL/6J (56 days, male) 9.8
607 Antisense, RP_040507_01_C09, Mouse strain C57BL/6J (56 days, male) 9.1
608 Sense, RPS_Baylor_37008, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.