We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
OLFM1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • OLFM1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:410.4 nTPM
HPA:410.4 nTPM
GTEx:632.2 nTPM
FANTOM5:349.9 Scaled Tags Per Million
Pig:405.8 nTPM
Mouse:1057.5 nTPM
Allen mouse:23.5 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 410.4
Sample id Sample description nTPM
Amygdala
nTPM: 317.6
2517 Female, age 94, left hemisphere 333.8
1987 Female, age 91, left hemisphere 329.6
2514 Male, age 75, right hemisphere 326.5
2814 Male, age 76, right hemisphere 315.2
2695 Female, age 67, right hemisphere 282.9
Basal amygdala
nTPM: 388.7
2243 Female, age 91, right hemisphere 471.9
2685 Female, age 94, left hemisphere 383.8
2110 Male, age 80, left hemisphere 383.6
2609 Male, age 75, right hemisphere 371.3
2827 Female, age 67, right hemisphere 370.6
1955 Male, age 76, both hemispheres 351.2
Central amygdala
nTPM: 333.8
2239 Male, age 80, left hemisphere 377.1
2826 Female, age 94, left hemisphere 376.8
2515 Male, age 75, right hemisphere 323.2
1905 Male, age 76, both hemispheres 314.4
2701 Female, age 91, right hemisphere 277.3
Corticomedial amygdala
nTPM: 410.4
2829 Male, age 80, left hemisphere 496.5
2242 Female, age 91, right hemisphere 477.3
2535 Female, age 67, right hemisphere 385.7
2429 Female, age 94, left hemisphere 371.8
2428 Male, age 75, right hemisphere 371.4
2240 Male, age 76, both hemispheres 359.4
Lateral amygdala
nTPM: 343.3
2534 Female, age 94, left hemisphere 417.3
2256 Male, age 80, left hemisphere 352.9
2516 Male, age 75, right hemisphere 337.7
1883 Male, age 76, both hemispheres 333.2
2830 Female, age 67, right hemisphere 313.7
2255 Female, age 91, right hemisphere 305.2
Stria terminalis, bed nucleus
nTPM: 353.9
1974 Female, age 91, both hemispheres 411.4
2486 Female, age 94, both hemispheres 366.1
2201 Male, age 74, unknown 284.2

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 632.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 632.2
Samples: 152

Max nTPM: 2101.0
Min nTPM: 25.3
Std nTPM: 298.0
Median nTPM: 591.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2101.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1605.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1374.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1321.0
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1291.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1264.6
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1254.1
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1218.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1131.5
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1123.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1087.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1071.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1054.0
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1037.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1034.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 1026.6
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 966.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 958.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 955.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 954.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 950.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 927.4
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 918.8
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 915.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 901.8
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 892.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 885.4
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 883.1
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 881.2
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 857.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 841.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 836.0
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 808.1
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 804.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 794.0
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 781.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 765.6
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 755.8
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 748.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 722.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 722.4
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 721.9
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 720.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 718.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 714.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 705.1
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 703.1
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 701.3
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 700.4
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 699.8
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 685.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 681.7
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 680.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 678.7
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 676.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 675.0
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 673.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 669.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 668.9
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 666.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 661.6
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 661.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 660.0
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 652.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 641.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 639.3
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 631.8
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 620.1
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 619.2
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 614.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 612.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 610.5
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 601.1
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 599.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 594.6
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 592.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 591.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 591.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 584.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 577.9
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 576.5
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 564.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 564.4
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 563.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 563.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 561.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 557.4
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 553.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 551.2
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 551.2
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 549.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 546.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 540.8
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 539.0
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 534.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 531.9
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 529.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 519.6
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 510.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 510.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 495.2
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 493.7
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 493.3
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 490.3
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 485.4
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 474.4
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 468.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 464.5
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 457.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 449.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 433.2
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 423.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 414.4
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 412.8
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 404.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 402.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 397.8
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 391.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 387.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 375.4
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 374.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 370.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 369.3
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 367.4
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 361.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 359.7
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 355.6
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 351.4
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 345.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 344.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 341.2
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 339.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 334.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 329.6
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 328.4
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 325.9
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 323.5
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 318.9
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 296.8
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 292.5
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 290.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 290.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 265.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 256.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 252.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 242.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 219.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 217.6
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 195.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 188.9
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 155.7
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 25.3
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 349.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 349.9
FF:10151-102I7 76 years, female 349.9

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 405.8
Pig sample Sample description nTPM
Amygdala
nTPM: 405.8
Samples: 4

Max nTPM: 580.7
Min nTPM: 273.3
Sample A Female 580.7
Sample B Female 273.3
Sample C Male 403.8
Sample D Male 365.2

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1057.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 1057.4
Samples: 4

Max nTPM: 1126.1
Min nTPM: 1016.0
Sample A Male 1016.0
Sample B Male 1025.4
Sample C Female 1126.1
Sample D Female 1062.2

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 23.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 23.5
760 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 23.5
761 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 18.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.