HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:474.7 nTPM
HPA:474.7 nTPM
GTEx:646.2 nTPM
FANTOM5:403.3 Scaled Tags Per Million
Pig:497.0 nTPM
Mouse:850.4 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 474.7
Sample id Sample description nTPM
Hippocampus
nTPM: 446.8
1898 Male, age 80, left hemisphere 527.2
2148 Female, age 91, left hemisphere 497.5
1855 Male, age 76, left hemisphere 468.1
2621 Female, age 67, right hemisphere 429.5
1911 Female, age 85, right hemisphere 400.0
2529 Female, age 94, left hemisphere 358.7
Dentate gyrus
nTPM: 457.1
2531 Female, age 67, both hemispheres 581.9
1927 Female, age 91, both hemispheres 465.4
2010 Male, age 76, both hemispheres 464.4
2246 Female, age 85, both hemispheres 416.7
2528 Male, age 74, both hemispheres 414.7
2530 Female, age 94, left hemisphere 399.4
Entorhinal gyrus
nTPM: 372.0
2764 Male, age 80, right hemisphere 433.2
1787 Male, age 76, left hemisphere 385.7
1938 Female, age 85, left hemisphere 381.4
2117 Female, age 91, right hemisphere 349.1
2686 Male, age 75, right hemisphere 341.6
2613 Female, age 94, left hemisphere 340.7
Hippocampus, CA1
nTPM: 444.0
2045 Male, age 76, both hemispheres 514.2
2749 Male, age 80, left hemisphere 499.1
1873 Female, age 85, both hemispheres 474.9
2527 Male, age 74, both hemispheres 400.2
2082 Female, age 91, right hemisphere 331.6
Hippocampus, CA2
nTPM: 408.4
1963 Male, age 80, left hemisphere 494.6
1892 Male, age 76, both hemispheres 452.3
1940 Female, age 85, left hemisphere 393.2
2437 Female, age 94, left hemisphere 373.3
2249 Male, age 74, both hemispheres 370.2
2113 Female, age 91, right hemisphere 367.0
Hippocampus, CA3
nTPM: 461.3
2861 Female, age 67, both hemispheres 570.9
2620 Female, age 94, left hemisphere 510.1
2137 Male, age 80, left hemisphere 506.6
1867 Male, age 76, both hemispheres 426.5
1891 Female, age 85, both hemispheres 392.3
2436 Male, age 74, both hemispheres 361.3
Parahippocampal cortex
nTPM: 414.9
2245 Female, age 91, both hemispheres 464.1
2532 Female, age 72, left hemisphere 459.2
1850 Male, age 80, both hemispheres 440.6
2250 Female, age 67, right hemisphere 430.7
2622 Female, age 67, right hemisphere 426.3
2693 Female, age 94, both hemispheres 425.1
1933 Female, age 85, both hemispheres 415.6
2018 Male, age 76, both hemispheres 390.2
1990 Female, age 91, right hemisphere 369.6
2692 Male, age 74, both hemispheres 327.7
Perirhinal gyrus
nTPM: 474.7
1794 Male, age 80, right hemisphere 532.8
1841 Female, age 85, right hemisphere 492.8
2521 Female, age 94, right hemisphere 466.7
1847 Female, age 91, left hemisphere 444.9
2848 Male, age 76, right hemisphere 436.1
Subiculum
nTPM: 363.2
2729 Female, age 91, right hemisphere 403.5
1977 Female, age 85, both hemispheres 392.3
1901 Male, age 80, both hemispheres 381.8
2619 Male, age 74, both hemispheres 351.8
2042 Male, age 76, both hemispheres 331.8
2438 Female, age 94, left hemisphere 317.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 646.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 646.2
Samples: 197

Max nTPM: 1689.2
Min nTPM: 90.2
Std nTPM: 335.1
Median nTPM: 608.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 1689.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1509.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1508.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 1508.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1448.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1440.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 1419.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1372.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 1342.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1340.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 1301.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 403.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 403.3
FF:10169-103B7 60 years, female 580.7
FF:10153-102I9 76 years, female 226.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 497.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 497.0
Samples: 4

Max nTPM: 691.4
Min nTPM: 310.7
Sample A Female 691.4
Sample B Female 623.6
Sample C Male 310.7
Sample D Male 362.2
Entorhinal cortex
nTPM: 458.8
Samples: 4

Max nTPM: 522.0
Min nTPM: 373.3
Sample A Female 522.0
Sample B Female 434.4
Sample C Male 505.4
Sample D Male 373.3
Subiculum
nTPM: 350.0
Samples: 4

Max nTPM: 414.0
Min nTPM: 287.7
Sample A Female 414.0
Sample B Female 319.2
Sample C Male 287.7
Sample D Male 379.2
Ventral hippocampus
nTPM: 398.6
Samples: 4

Max nTPM: 588.8
Min nTPM: 244.2
Sample A Female 404.3
Sample B Female 244.2
Sample C Male 356.9
Sample D Male 588.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 850.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 831.3
Samples: 4

Max nTPM: 872.7
Min nTPM: 731.3
Sample A Male 859.7
Sample B Male 861.6
Sample C Female 731.3
Sample D Female 872.7
Hippocampal formation
nTPM: 850.5
Samples: 4

Max nTPM: 961.9
Min nTPM: 735.4
Sample A Male 797.5
Sample B Male 961.9
Sample C Female 907.0
Sample D Female 735.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
761 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 18.5
760 Antisense, RP_040324_01_F03, Mouse strain C57BL/6J (56 days, male) 18.5

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The Human Protein Atlas

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