HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.2 nTPM
HPA:50.2 nTPM
GTEx:56.8 nTPM
FANTOM5:258.0 Scaled Tags Per Million
Pig:68.1 nTPM
Mouse:328.7 nTPM
Allen mouse:20.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049531
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.2
Sample id Sample description nTPM
Hippocampus
nTPM: 45.6
1898 Male, age 80, left hemisphere 60.4
2529 Female, age 94, left hemisphere 46.8
1855 Male, age 76, left hemisphere 45.8
1911 Female, age 85, right hemisphere 42.0
2621 Female, age 67, right hemisphere 39.8
2148 Female, age 91, left hemisphere 38.6
Dentate gyrus
nTPM: 43.0
2010 Male, age 76, both hemispheres 51.0
1927 Female, age 91, both hemispheres 49.8
2530 Female, age 94, left hemisphere 43.7
2246 Female, age 85, both hemispheres 39.1
2528 Male, age 74, both hemispheres 39.1
2531 Female, age 67, both hemispheres 35.1
Entorhinal gyrus
nTPM: 37.6
1938 Female, age 85, left hemisphere 43.6
2686 Male, age 75, right hemisphere 39.2
2117 Female, age 91, right hemisphere 38.0
2764 Male, age 80, right hemisphere 37.6
1787 Male, age 76, left hemisphere 36.5
2613 Female, age 94, left hemisphere 30.6
Hippocampus, CA1
nTPM: 50.2
2749 Male, age 80, left hemisphere 68.3
1873 Female, age 85, both hemispheres 53.5
2045 Male, age 76, both hemispheres 51.8
2527 Male, age 74, both hemispheres 38.7
2082 Female, age 91, right hemisphere 38.5
Hippocampus, CA2
nTPM: 43.7
1963 Male, age 80, left hemisphere 58.4
1892 Male, age 76, both hemispheres 56.7
2249 Male, age 74, both hemispheres 39.1
2437 Female, age 94, left hemisphere 38.8
2113 Female, age 91, right hemisphere 35.2
1940 Female, age 85, left hemisphere 34.0
Hippocampus, CA3
nTPM: 42.9
2137 Male, age 80, left hemisphere 55.8
1867 Male, age 76, both hemispheres 50.6
1891 Female, age 85, both hemispheres 47.1
2861 Female, age 67, both hemispheres 37.7
2436 Male, age 74, both hemispheres 34.0
2620 Female, age 94, left hemisphere 32.4
Parahippocampal cortex
nTPM: 38.2
1850 Male, age 80, both hemispheres 48.9
2018 Male, age 76, both hemispheres 44.7
1933 Female, age 85, both hemispheres 44.3
2250 Female, age 67, right hemisphere 42.6
1990 Female, age 91, right hemisphere 39.3
2245 Female, age 91, both hemispheres 36.8
2693 Female, age 94, both hemispheres 35.3
2532 Female, age 72, left hemisphere 33.6
2692 Male, age 74, both hemispheres 30.9
2622 Female, age 67, right hemisphere 25.4
Perirhinal gyrus
nTPM: 47.5
1847 Female, age 91, left hemisphere 57.4
1841 Female, age 85, right hemisphere 55.5
1794 Male, age 80, right hemisphere 44.9
2521 Female, age 94, right hemisphere 41.3
2848 Male, age 76, right hemisphere 38.3
Subiculum
nTPM: 39.9
1977 Female, age 85, both hemispheres 46.6
1901 Male, age 80, both hemispheres 44.0
2438 Female, age 94, left hemisphere 41.3
2729 Female, age 91, right hemisphere 39.7
2042 Male, age 76, both hemispheres 37.0
2619 Male, age 74, both hemispheres 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.8
Samples: 197

Max nTPM: 121.7
Min nTPM: 20.4
Std nTPM: 22.3
Median nTPM: 53.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 121.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 115.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 114.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 113.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 112.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 109.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 106.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 104.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 102.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 101.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 101.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 258.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 258.0
FF:10169-103B7 60 years, female 337.9
FF:10153-102I9 76 years, female 178.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 62.8
Samples: 4

Max nTPM: 74.5
Min nTPM: 49.9
Sample A Female 74.5
Sample B Female 63.5
Sample C Male 63.1
Sample D Male 49.9
Entorhinal cortex
nTPM: 63.9
Samples: 4

Max nTPM: 71.4
Min nTPM: 52.1
Sample A Female 62.9
Sample B Female 71.4
Sample C Male 69.3
Sample D Male 52.1
Subiculum
nTPM: 68.2
Samples: 4

Max nTPM: 88.1
Min nTPM: 56.8
Sample A Female 88.1
Sample B Female 65.1
Sample C Male 62.6
Sample D Male 56.8
Ventral hippocampus
nTPM: 65.5
Samples: 4

Max nTPM: 85.7
Min nTPM: 52.8
Sample A Female 60.4
Sample B Female 52.8
Sample C Male 85.7
Sample D Male 62.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 328.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 289.9
Samples: 4

Max nTPM: 331.0
Min nTPM: 265.4
Sample A Male 265.4
Sample B Male 266.0
Sample C Female 297.3
Sample D Female 331.0
Hippocampal formation
nTPM: 328.7
Samples: 4

Max nTPM: 358.1
Min nTPM: 297.6
Sample A Male 358.1
Sample B Male 332.4
Sample C Female 326.6
Sample D Female 297.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.0
70919698 Antisense, RP_050713_01_H06, Mouse strain C57BL/6J (56 days, male) 20.9
544899 Antisense, RP_040617_02_H01, Mouse strain C57BL/6J (56 days, male) 19.2

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The Human Protein Atlas

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