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CHMP2A
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  • CHMP2A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:154.8 nTPM
FANTOM5:115.8 Scaled Tags Per Million
Pig:46.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041153Antibody HPA042031
Glial cells Not detectedLow
Neuronal cells MediumHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 154.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 154.8
Samples: 246

Max nTPM: 300.6
Min nTPM: 85.0
Std nTPM: 33.9
Median nTPM: 147.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 300.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 284.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 263.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 259.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 258.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 257.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 255.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 242.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 238.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 234.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 233.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 225.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 218.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 216.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 215.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 210.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 208.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 206.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 205.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 205.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 203.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 203.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 203.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 202.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 201.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 201.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 199.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 199.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 191.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 191.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 190.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 189.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 188.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 188.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 188.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 185.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 185.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 184.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 182.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 182.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 180.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 179.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 179.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 178.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 177.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 177.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 177.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 176.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 176.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 176.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 175.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 175.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 175.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 174.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 173.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 172.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 171.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 170.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 169.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 169.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 169.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 169.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 167.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 167.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 167.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 166.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 166.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 165.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 165.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 165.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 165.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 164.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 164.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 164.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 164.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 163.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 163.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 161.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 161.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 160.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 160.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 160.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 160.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 159.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 159.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 159.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 159.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 159.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 158.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 158.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 158.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 157.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 155.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 155.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 155.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 154.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 154.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 154.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 154.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 152.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 152.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 152.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 152.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 151.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 151.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 151.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 151.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 151.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 151.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 151.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 151.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 150.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 150.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 150.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 150.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 150.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 150.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 150.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 149.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 148.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 148.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 147.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 147.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 147.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 147.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 147.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 147.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 147.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 147.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 147.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 147.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 146.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 146.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 145.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 144.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 144.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 143.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 143.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 143.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 143.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 142.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 142.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 142.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 142.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 141.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 141.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 141.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 140.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 139.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 139.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 139.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 139.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 139.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 139.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 138.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 138.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 138.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 138.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 138.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 138.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 137.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 137.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 136.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 136.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 136.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 136.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 136.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 136.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 135.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 134.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 134.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 134.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 134.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 134.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 134.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 134.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 133.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 133.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 133.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 133.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 133.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 132.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 132.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 132.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 131.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 131.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 131.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 130.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 130.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 130.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 130.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 129.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 129.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 129.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 129.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 128.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 128.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 128.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 128.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 127.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 127.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 127.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 127.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 127.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 127.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 127.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 126.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 126.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 126.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 125.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 125.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 125.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 124.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 123.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 123.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 123.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 122.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 122.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 122.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 122.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 122.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 121.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 120.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 119.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 119.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 117.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 117.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 116.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 116.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 115.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 114.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 112.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 111.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 109.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 105.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 104.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 102.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 99.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 96.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 88.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 85.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 115.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 115.8
FF:10164-103B2 76 years, female 115.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 46.3
Pig sample Sample description nTPM
Caudate
nTPM: 46.3
Samples: 4

Max nTPM: 52.5
Min nTPM: 38.5
Sample A Female 43.1
Sample B Female 51.2
Sample C Male 52.5
Sample D Male 38.5

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