HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:102.3 nTPM
HPA:102.3 nTPM
GTEx:118.1 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:26.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044004
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.3
Sample id Sample description nTPM
Hippocampus
nTPM: 96.4
2621 Female, age 67, right hemisphere 100.0
1898 Male, age 80, left hemisphere 99.1
2529 Female, age 94, left hemisphere 97.9
1855 Male, age 76, left hemisphere 95.9
1911 Female, age 85, right hemisphere 92.8
2148 Female, age 91, left hemisphere 92.7
Dentate gyrus
nTPM: 97.3
2530 Female, age 94, left hemisphere 102.0
2010 Male, age 76, both hemispheres 99.6
1927 Female, age 91, both hemispheres 98.4
2246 Female, age 85, both hemispheres 97.2
2531 Female, age 67, both hemispheres 94.5
2528 Male, age 74, both hemispheres 92.2
Entorhinal gyrus
nTPM: 100.4
2764 Male, age 80, right hemisphere 106.1
1938 Female, age 85, left hemisphere 103.7
1787 Male, age 76, left hemisphere 103.2
2613 Female, age 94, left hemisphere 101.2
2117 Female, age 91, right hemisphere 96.5
2686 Male, age 75, right hemisphere 91.6
Hippocampus, CA1
nTPM: 99.2
2749 Male, age 80, left hemisphere 109.5
2045 Male, age 76, both hemispheres 97.4
2527 Male, age 74, both hemispheres 96.6
2082 Female, age 91, right hemisphere 96.5
1873 Female, age 85, both hemispheres 95.7
Hippocampus, CA2
nTPM: 96.3
1963 Male, age 80, left hemisphere 99.5
1892 Male, age 76, both hemispheres 97.8
2437 Female, age 94, left hemisphere 96.3
2113 Female, age 91, right hemisphere 95.9
1940 Female, age 85, left hemisphere 94.4
2249 Male, age 74, both hemispheres 94.2
Hippocampus, CA3
nTPM: 97.6
2137 Male, age 80, left hemisphere 104.2
2620 Female, age 94, left hemisphere 101.1
1867 Male, age 76, both hemispheres 97.5
2861 Female, age 67, both hemispheres 96.2
2436 Male, age 74, both hemispheres 95.4
1891 Female, age 85, both hemispheres 91.4
Parahippocampal cortex
nTPM: 95.9
1933 Female, age 85, both hemispheres 99.4
2532 Female, age 72, left hemisphere 99.2
2245 Female, age 91, both hemispheres 98.5
1990 Female, age 91, right hemisphere 97.3
2250 Female, age 67, right hemisphere 97.0
2018 Male, age 76, both hemispheres 96.7
1850 Male, age 80, both hemispheres 95.8
2622 Female, age 67, right hemisphere 94.1
2692 Male, age 74, both hemispheres 91.2
2693 Female, age 94, both hemispheres 90.4
Perirhinal gyrus
nTPM: 102.3
1794 Male, age 80, right hemisphere 107.7
1847 Female, age 91, left hemisphere 107.2
1841 Female, age 85, right hemisphere 103.5
2848 Male, age 76, right hemisphere 97.2
2521 Female, age 94, right hemisphere 95.7
Subiculum
nTPM: 93.2
1977 Female, age 85, both hemispheres 100.9
1901 Male, age 80, both hemispheres 96.1
2619 Male, age 74, both hemispheres 95.6
2042 Male, age 76, both hemispheres 90.6
2729 Female, age 91, right hemisphere 88.3
2438 Female, age 94, left hemisphere 87.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.1
Samples: 197

Max nTPM: 307.3
Min nTPM: 29.9
Std nTPM: 43.5
Median nTPM: 112.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 307.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 264.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 233.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 230.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 229.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 216.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 208.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 203.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 200.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 199.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 184.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10169-103B7 60 years, female 65.9
FF:10153-102I9 76 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 35.5
Min nTPM: 16.7
Sample A Female 35.5
Sample B Female 26.2
Sample C Male 25.2
Sample D Male 16.7
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 28.3
Min nTPM: 17.0
Sample A Female 24.2
Sample B Female 25.1
Sample C Male 28.3
Sample D Male 17.0
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 32.5
Min nTPM: 20.8
Sample A Female 32.5
Sample B Female 22.7
Sample C Male 22.8
Sample D Male 20.8
Ventral hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 30.2
Min nTPM: 15.7
Sample A Female 23.7
Sample B Female 15.7
Sample C Male 30.2
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 26.3
Min nTPM: 18.5
Sample A Male 21.6
Sample B Male 23.3
Sample C Female 26.3
Sample D Female 18.5
Hippocampal formation
nTPM: 26.9
Samples: 4

Max nTPM: 32.4
Min nTPM: 24.0
Sample A Male 26.2
Sample B Male 24.8
Sample C Female 24.0
Sample D Female 32.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74581002 Antisense, RP_060215_02_D01, Mouse strain C57BL/6J (56 days, male) 0.3

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