COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:13.9 nTPM
HPA:6.8 nTPM
GTEx:13.9 nTPM
FANTOM5:14.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - Antibody stainingi
Antibody HPA055904
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 6.8
overview
Male, age 54 		Colon sample 67
nTPM: 16.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 11.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 18.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 11.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 1.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 1.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 1.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 2.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 2.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 2.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 13.6
Samples: 373

Max nTPM: 41.5
Min nTPM: 3.8
Std nTPM: 6.4
Median nTPM: 12.4
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 41.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 38.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 35.0
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 34.2
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 32.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 31.5
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 31.5
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 30.7
GTEX-WRHK-1126-SM-4MVOJ 20-29 years, female 30.5
GTEX-1JJEA-2526-SM-CY8HJ 60-69 years, male 30.3
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 28.8
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Colon - Transverse
Average nTPM: 13.9
Samples: 406

Max nTPM: 41.9
Min nTPM: 2.7
Std nTPM: 6.6
Median nTPM: 12.7
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 41.9
GTEX-11GSP-1626-SM-5986N 60-69 years, female 36.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 32.3
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 32.1
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 31.8
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 30.5
GTEX-1H1E6-1926-SM-9OSWD 30-39 years, male 30.0
GTEX-17HGU-2426-SM-7EWDP 50-59 years, male 29.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 29.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 28.8
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 28.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 14.2
FF:10014-101C5 62,83,84 years, mixed 14.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.