HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.6 nTPM
HPA:17.6 nTPM
GTEx:15.6 nTPM
FANTOM5:41.8 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:23.1 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008512Antibody HPA012018
Glial cells LowMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
1898 Male, age 80, left hemisphere 16.2
2148 Female, age 91, left hemisphere 15.6
2621 Female, age 67, right hemisphere 15.4
2529 Female, age 94, left hemisphere 14.9
1911 Female, age 85, right hemisphere 14.1
1855 Male, age 76, left hemisphere 13.8
Dentate gyrus
nTPM: 15.3
2530 Female, age 94, left hemisphere 17.3
1927 Female, age 91, both hemispheres 15.3
2528 Male, age 74, both hemispheres 15.2
2531 Female, age 67, both hemispheres 15.1
2010 Male, age 76, both hemispheres 14.7
2246 Female, age 85, both hemispheres 14.0
Entorhinal gyrus
nTPM: 17.6
2764 Male, age 80, right hemisphere 21.4
2613 Female, age 94, left hemisphere 19.5
1787 Male, age 76, left hemisphere 17.6
1938 Female, age 85, left hemisphere 16.8
2117 Female, age 91, right hemisphere 16.1
2686 Male, age 75, right hemisphere 14.5
Hippocampus, CA1
nTPM: 15.3
2749 Male, age 80, left hemisphere 19.9
2527 Male, age 74, both hemispheres 15.2
2045 Male, age 76, both hemispheres 14.2
1873 Female, age 85, both hemispheres 14.0
2082 Female, age 91, right hemisphere 13.0
Hippocampus, CA2
nTPM: 15.3
1963 Male, age 80, left hemisphere 16.9
2249 Male, age 74, both hemispheres 16.0
1892 Male, age 76, both hemispheres 15.6
2437 Female, age 94, left hemisphere 15.3
2113 Female, age 91, right hemisphere 14.2
1940 Female, age 85, left hemisphere 14.1
Hippocampus, CA3
nTPM: 15.7
2620 Female, age 94, left hemisphere 19.0
2137 Male, age 80, left hemisphere 17.3
2861 Female, age 67, both hemispheres 15.0
2436 Male, age 74, both hemispheres 14.8
1867 Male, age 76, both hemispheres 14.4
1891 Female, age 85, both hemispheres 13.6
Parahippocampal cortex
nTPM: 15.7
1990 Female, age 91, right hemisphere 17.2
1850 Male, age 80, both hemispheres 16.9
2532 Female, age 72, left hemisphere 16.2
1933 Female, age 85, both hemispheres 16.1
2245 Female, age 91, both hemispheres 16.0
2250 Female, age 67, right hemisphere 15.9
2622 Female, age 67, right hemisphere 15.2
2692 Male, age 74, both hemispheres 15.2
2693 Female, age 94, both hemispheres 14.6
2018 Male, age 76, both hemispheres 14.1
Perirhinal gyrus
nTPM: 17.3
1794 Male, age 80, right hemisphere 20.0
1847 Female, age 91, left hemisphere 17.6
2848 Male, age 76, right hemisphere 16.8
2521 Female, age 94, right hemisphere 16.1
1841 Female, age 85, right hemisphere 15.8
Subiculum
nTPM: 14.9
1977 Female, age 85, both hemispheres 17.4
2619 Male, age 74, both hemispheres 16.0
1901 Male, age 80, both hemispheres 14.9
2729 Female, age 91, right hemisphere 14.5
2438 Female, age 94, left hemisphere 13.7
2042 Male, age 76, both hemispheres 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 26.3
Min nTPM: 9.7
Std nTPM: 2.7
Median nTPM: 15.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 26.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 22.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 20.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 20.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 20.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 20.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 20.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.8
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 39.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 16.2
Min nTPM: 7.8
Sample A Female 16.2
Sample B Female 10.8
Sample C Male 10.0
Sample D Male 7.8
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.5
Sample A Female 9.1
Sample B Female 9.6
Sample C Male 10.2
Sample D Male 7.5
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 14.3
Min nTPM: 6.5
Sample A Female 14.3
Sample B Female 8.8
Sample C Male 8.8
Sample D Male 6.5
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 13.1
Min nTPM: 7.4
Sample A Female 10.7
Sample B Female 7.4
Sample C Male 13.1
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 24.1
Min nTPM: 19.5
Sample A Male 20.7
Sample B Male 19.5
Sample C Female 20.3
Sample D Female 24.1
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 28.4
Min nTPM: 18.6
Sample A Male 18.6
Sample B Male 22.9
Sample C Female 28.4
Sample D Female 22.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
71808747 Antisense, RP_051005_01_A11, Mouse strain C57BL/6J (56 days, male) 1.7

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