HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:53.2 nTPM
HPA:53.2 nTPM
GTEx:83.8 nTPM
FANTOM5:80.7 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:16.7 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.2
Sample id Sample description nTPM
Hippocampus
nTPM: 53.2
2621 Female, age 67, right hemisphere 78.6
2529 Female, age 94, left hemisphere 58.5
1911 Female, age 85, right hemisphere 53.2
2148 Female, age 91, left hemisphere 47.3
1855 Male, age 76, left hemisphere 41.3
1898 Male, age 80, left hemisphere 40.2
Dentate gyrus
nTPM: 42.4
2531 Female, age 67, both hemispheres 55.6
1927 Female, age 91, both hemispheres 54.3
2530 Female, age 94, left hemisphere 42.2
2010 Male, age 76, both hemispheres 36.8
2528 Male, age 74, both hemispheres 36.6
2246 Female, age 85, both hemispheres 29.2
Entorhinal gyrus
nTPM: 37.2
2613 Female, age 94, left hemisphere 46.8
1787 Male, age 76, left hemisphere 41.3
2686 Male, age 75, right hemisphere 37.7
2117 Female, age 91, right hemisphere 33.0
2764 Male, age 80, right hemisphere 32.8
1938 Female, age 85, left hemisphere 31.4
Hippocampus, CA1
nTPM: 48.0
2749 Male, age 80, left hemisphere 70.0
2527 Male, age 74, both hemispheres 58.9
2082 Female, age 91, right hemisphere 43.6
1873 Female, age 85, both hemispheres 36.8
2045 Male, age 76, both hemispheres 30.5
Hippocampus, CA2
nTPM: 47.0
1963 Male, age 80, left hemisphere 86.7
2113 Female, age 91, right hemisphere 44.8
2437 Female, age 94, left hemisphere 41.4
2249 Male, age 74, both hemispheres 41.0
1892 Male, age 76, both hemispheres 38.5
1940 Female, age 85, left hemisphere 29.3
Hippocampus, CA3
nTPM: 49.7
2137 Male, age 80, left hemisphere 77.2
2861 Female, age 67, both hemispheres 71.3
2620 Female, age 94, left hemisphere 45.5
1867 Male, age 76, both hemispheres 38.7
2436 Male, age 74, both hemispheres 36.9
1891 Female, age 85, both hemispheres 28.3
Parahippocampal cortex
nTPM: 36.6
2245 Female, age 91, both hemispheres 55.2
2018 Male, age 76, both hemispheres 48.6
2622 Female, age 67, right hemisphere 47.9
2250 Female, age 67, right hemisphere 40.4
2693 Female, age 94, both hemispheres 33.4
1933 Female, age 85, both hemispheres 29.6
1990 Female, age 91, right hemisphere 29.3
2692 Male, age 74, both hemispheres 28.7
1850 Male, age 80, both hemispheres 27.7
2532 Female, age 72, left hemisphere 25.6
Perirhinal gyrus
nTPM: 35.8
1847 Female, age 91, left hemisphere 43.6
2521 Female, age 94, right hemisphere 38.0
1794 Male, age 80, right hemisphere 35.0
2848 Male, age 76, right hemisphere 32.8
1841 Female, age 85, right hemisphere 29.8
Subiculum
nTPM: 32.5
1901 Male, age 80, both hemispheres 36.6
2042 Male, age 76, both hemispheres 36.6
2619 Male, age 74, both hemispheres 36.0
2729 Female, age 91, right hemisphere 34.0
1977 Female, age 85, both hemispheres 28.0
2438 Female, age 94, left hemisphere 23.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.8
Samples: 197

Max nTPM: 403.3
Min nTPM: 9.7
Std nTPM: 54.1
Median nTPM: 71.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 403.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 271.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 268.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 222.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 213.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 213.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 204.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 203.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 199.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 198.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 191.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.7
FF:10169-103B7 60 years, female 89.9
FF:10153-102I9 76 years, female 71.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 20.6
Min nTPM: 15.8
Sample A Female 20.6
Sample B Female 17.9
Sample C Male 18.0
Sample D Male 15.8
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 23.1
Min nTPM: 16.8
Sample A Female 19.7
Sample B Female 17.2
Sample C Male 23.1
Sample D Male 16.8
Subiculum
nTPM: 15.2
Samples: 4

Max nTPM: 20.2
Min nTPM: 11.4
Sample A Female 20.2
Sample B Female 12.9
Sample C Male 16.1
Sample D Male 11.4
Ventral hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 21.3
Min nTPM: 12.2
Sample A Female 13.7
Sample B Female 12.2
Sample C Male 21.3
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.3
Sample A Male 18.2
Sample B Male 18.0
Sample C Female 14.3
Sample D Female 16.4
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 18.3
Min nTPM: 11.2
Sample A Male 11.2
Sample B Male 18.3
Sample C Female 14.6
Sample D Female 16.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
71022633 Antisense, RP_050713_04_H03, Mouse strain C57BL/6J (56 days, male) 4.3

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