HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:15.9 nTPM
FANTOM5:69.6 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:5.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.3
2529 Female, age 94, left hemisphere 11.8
1911 Female, age 85, right hemisphere 11.4
1898 Male, age 80, left hemisphere 9.1
2621 Female, age 67, right hemisphere 8.9
1855 Male, age 76, left hemisphere 7.9
2148 Female, age 91, left hemisphere 7.0
Dentate gyrus
nTPM: 9.8
2530 Female, age 94, left hemisphere 16.0
2528 Male, age 74, both hemispheres 10.1
2010 Male, age 76, both hemispheres 9.0
2246 Female, age 85, both hemispheres 8.7
2531 Female, age 67, both hemispheres 7.9
1927 Female, age 91, both hemispheres 6.8
Entorhinal gyrus
nTPM: 9.8
2117 Female, age 91, right hemisphere 12.8
2686 Male, age 75, right hemisphere 10.3
2764 Male, age 80, right hemisphere 9.7
1787 Male, age 76, left hemisphere 8.6
1938 Female, age 85, left hemisphere 8.6
2613 Female, age 94, left hemisphere 8.6
Hippocampus, CA1
nTPM: 8.1
2527 Male, age 74, both hemispheres 9.7
1873 Female, age 85, both hemispheres 9.1
2082 Female, age 91, right hemisphere 8.4
2749 Male, age 80, left hemisphere 7.7
2045 Male, age 76, both hemispheres 5.8
Hippocampus, CA2
nTPM: 10.3
2437 Female, age 94, left hemisphere 11.6
1963 Male, age 80, left hemisphere 11.4
2249 Male, age 74, both hemispheres 10.9
1940 Female, age 85, left hemisphere 10.8
2113 Female, age 91, right hemisphere 9.6
1892 Male, age 76, both hemispheres 7.5
Hippocampus, CA3
nTPM: 7.9
1891 Female, age 85, both hemispheres 12.7
1867 Male, age 76, both hemispheres 7.6
2436 Male, age 74, both hemispheres 7.5
2861 Female, age 67, both hemispheres 7.0
2137 Male, age 80, left hemisphere 6.2
2620 Female, age 94, left hemisphere 6.2
Parahippocampal cortex
nTPM: 9.0
2692 Male, age 74, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.7
1850 Male, age 80, both hemispheres 9.7
1990 Female, age 91, right hemisphere 9.4
2018 Male, age 76, both hemispheres 9.3
1933 Female, age 85, both hemispheres 9.0
2245 Female, age 91, both hemispheres 8.1
2693 Female, age 94, both hemispheres 8.1
2250 Female, age 67, right hemisphere 6.4
2622 Female, age 67, right hemisphere 6.1
Perirhinal gyrus
nTPM: 8.0
2848 Male, age 76, right hemisphere 10.2
1841 Female, age 85, right hemisphere 8.1
2521 Female, age 94, right hemisphere 7.6
1794 Male, age 80, right hemisphere 7.5
1847 Female, age 91, left hemisphere 6.5
Subiculum
nTPM: 12.9
2438 Female, age 94, left hemisphere 17.7
2042 Male, age 76, both hemispheres 16.1
1901 Male, age 80, both hemispheres 13.5
1977 Female, age 85, both hemispheres 11.8
2619 Male, age 74, both hemispheres 9.8
2729 Female, age 91, right hemisphere 8.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 46.2
Min nTPM: 3.6
Std nTPM: 8.9
Median nTPM: 13.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 46.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 45.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 42.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 42.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 37.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 36.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 36.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 35.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 34.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 34.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.6
FF:10169-103B7 60 years, female 75.3
FF:10153-102I9 76 years, female 63.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 27.3
Min nTPM: 11.0
Sample A Female 26.6
Sample B Female 16.2
Sample C Male 27.3
Sample D Male 11.0
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.7
Sample A Female 9.2
Sample B Female 10.8
Sample C Male 9.2
Sample D Male 7.7
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 12.6
Min nTPM: 11.0
Sample A Female 11.9
Sample B Female 12.6
Sample C Male 11.0
Sample D Male 12.5
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 19.3
Min nTPM: 9.6
Sample A Female 16.3
Sample B Female 9.6
Sample C Male 16.4
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.0
Sample A Male 4.8
Sample B Male 5.3
Sample C Female 4.4
Sample D Female 3.0
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.1
Min nTPM: 5.0
Sample A Male 5.9
Sample B Male 5.0
Sample C Female 6.1
Sample D Female 5.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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