HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.7 nTPM
HPA:14.7 nTPM
GTEx:14.9 nTPM
FANTOM5:75.4 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:9.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006344Antibody HPA056230Antibody CAB026379
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1.6
2529 Female, age 94, left hemisphere 7.4
2621 Female, age 67, right hemisphere 2.2
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
Dentate gyrus
nTPM: 0.0
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 6.4
2686 Male, age 75, right hemisphere 15.8
2764 Male, age 80, right hemisphere 10.6
1938 Female, age 85, left hemisphere 5.1
1787 Male, age 76, left hemisphere 3.3
2613 Female, age 94, left hemisphere 3.3
2117 Female, age 91, right hemisphere 0.3
Hippocampus, CA1
nTPM: 1.5
2527 Male, age 74, both hemispheres 7.6
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 2.2
2437 Female, age 94, left hemisphere 6.7
1892 Male, age 76, both hemispheres 5.2
2249 Male, age 74, both hemispheres 1.2
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
Hippocampus, CA3
nTPM: 1.4
1867 Male, age 76, both hemispheres 8.9
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 11.8
2245 Female, age 91, both hemispheres 20.1
2622 Female, age 67, right hemisphere 16.8
2250 Female, age 67, right hemisphere 15.0
1850 Male, age 80, both hemispheres 12.3
2693 Female, age 94, both hemispheres 10.8
2532 Female, age 72, left hemisphere 10.1
2018 Male, age 76, both hemispheres 10.0
1990 Female, age 91, right hemisphere 8.7
1933 Female, age 85, both hemispheres 7.2
2692 Male, age 74, both hemispheres 7.0
Perirhinal gyrus
nTPM: 14.7
2521 Female, age 94, right hemisphere 21.0
1847 Female, age 91, left hemisphere 18.7
1794 Male, age 80, right hemisphere 15.2
1841 Female, age 85, right hemisphere 13.2
2848 Male, age 76, right hemisphere 5.1
Subiculum
nTPM: 4.9
2438 Female, age 94, left hemisphere 11.6
2619 Male, age 74, both hemispheres 11.2
1977 Female, age 85, both hemispheres 5.6
1901 Male, age 80, both hemispheres 0.7
2042 Male, age 76, both hemispheres 0.1
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 90.7
Min nTPM: 2.5
Std nTPM: 10.6
Median nTPM: 11.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 90.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 76.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 47.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 44.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 37.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 36.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 36.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 34.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 33.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 33.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.4
FF:10169-103B7 60 years, female 96.2
FF:10153-102I9 76 years, female 54.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 8.1
Min nTPM: 3.3
Sample A Female 5.2
Sample B Female 4.3
Sample C Male 8.1
Sample D Male 3.3
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.3
Min nTPM: 14.2
Sample A Female 16.3
Sample B Female 14.9
Sample C Male 14.2
Sample D Male 14.8
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 31.2
Min nTPM: 9.8
Sample A Female 31.2
Sample B Female 13.2
Sample C Male 15.0
Sample D Male 9.8
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 18.6
Min nTPM: 6.3
Sample A Female 8.6
Sample B Female 7.9
Sample C Male 18.6
Sample D Male 6.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.6
Sample A Male 10.3
Sample B Male 8.6
Sample C Female 10.2
Sample D Female 9.3
Hippocampal formation
nTPM: 5.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.9
Sample A Male 4.9
Sample B Male 5.8
Sample C Female 5.0
Sample D Female 6.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69526522 Antisense, RP_050421_01_A05, Mouse strain C57BL/6J (56 days, male) 1.1
72128778 Antisense, RP_051017_04_D06, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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