COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:42.7 nTPM
HPA:33.8 nTPM
GTEx:42.7 nTPM
FANTOM5:57.8 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 33.8
overview
Male, age 54 		Colon sample 67
nTPM: 31
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 34.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 37.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 52.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 31.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 28.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 28.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 26.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 37.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 35.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 31.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 40.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 42.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 35.1
Samples: 373

Max nTPM: 82.4
Min nTPM: 11.6
Std nTPM: 7.5
Median nTPM: 35.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 82.4
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 68.6
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 59.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 57.7
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 55.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 54.4
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 51.7
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 51.6
GTEX-1JMQJ-2626-SM-CY8HQ 50-59 years, male 49.6
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 49.5
GTEX-1JJEA-2526-SM-CY8HJ 60-69 years, male 49.0
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Colon - Transverse
Average nTPM: 42.7
Samples: 406

Max nTPM: 115.2
Min nTPM: 15.0
Std nTPM: 15.2
Median nTPM: 38.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 115.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 98.9
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 91.7
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 90.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 89.8
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 87.5
GTEX-1H1E6-1926-SM-9OSWD 30-39 years, male 83.1
GTEX-14PK6-1726-SM-6871J 70-79 years, female 83.0
GTEX-ZLWG-1726-SM-DNZZ2 50-59 years, female 81.9
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 79.9
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 78.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 57.8
FF:10014-101C5 62,83,84 years, mixed 57.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.