HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:88.0 nTPM
HPA:88.0 nTPM
GTEx:91.0 nTPM
FANTOM5:264.8 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:115.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051248
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.0
Sample id Sample description nTPM
Hippocampus
nTPM: 88.0
1898 Male, age 80, left hemisphere 96.3
1855 Male, age 76, left hemisphere 93.2
1911 Female, age 85, right hemisphere 89.4
2529 Female, age 94, left hemisphere 85.3
2621 Female, age 67, right hemisphere 82.5
2148 Female, age 91, left hemisphere 81.3
Dentate gyrus
nTPM: 85.5
2010 Male, age 76, both hemispheres 89.7
1927 Female, age 91, both hemispheres 88.3
2528 Male, age 74, both hemispheres 87.7
2246 Female, age 85, both hemispheres 85.3
2530 Female, age 94, left hemisphere 85.3
2531 Female, age 67, both hemispheres 76.7
Entorhinal gyrus
nTPM: 79.3
2117 Female, age 91, right hemisphere 86.5
1938 Female, age 85, left hemisphere 83.5
1787 Male, age 76, left hemisphere 82.1
2686 Male, age 75, right hemisphere 76.8
2764 Male, age 80, right hemisphere 74.3
2613 Female, age 94, left hemisphere 72.7
Hippocampus, CA1
nTPM: 87.7
2749 Male, age 80, left hemisphere 94.2
1873 Female, age 85, both hemispheres 89.6
2045 Male, age 76, both hemispheres 87.7
2527 Male, age 74, both hemispheres 86.6
2082 Female, age 91, right hemisphere 80.2
Hippocampus, CA2
nTPM: 86.3
1892 Male, age 76, both hemispheres 93.4
2249 Male, age 74, both hemispheres 89.3
1940 Female, age 85, left hemisphere 85.7
1963 Male, age 80, left hemisphere 84.7
2113 Female, age 91, right hemisphere 82.5
2437 Female, age 94, left hemisphere 82.0
Hippocampus, CA3
nTPM: 84.9
2137 Male, age 80, left hemisphere 94.3
1867 Male, age 76, both hemispheres 90.2
2436 Male, age 74, both hemispheres 88.9
1891 Female, age 85, both hemispheres 85.8
2620 Female, age 94, left hemisphere 76.1
2861 Female, age 67, both hemispheres 74.0
Parahippocampal cortex
nTPM: 82.2
2250 Female, age 67, right hemisphere 87.4
2018 Male, age 76, both hemispheres 85.3
1850 Male, age 80, both hemispheres 84.2
2693 Female, age 94, both hemispheres 83.3
2245 Female, age 91, both hemispheres 82.4
1933 Female, age 85, both hemispheres 82.0
1990 Female, age 91, right hemisphere 81.0
2692 Male, age 74, both hemispheres 80.5
2532 Female, age 72, left hemisphere 78.6
2622 Female, age 67, right hemisphere 76.9
Perirhinal gyrus
nTPM: 84.1
1841 Female, age 85, right hemisphere 87.1
1794 Male, age 80, right hemisphere 84.8
2521 Female, age 94, right hemisphere 84.0
1847 Female, age 91, left hemisphere 82.4
2848 Male, age 76, right hemisphere 82.3
Subiculum
nTPM: 83.1
2729 Female, age 91, right hemisphere 87.3
2042 Male, age 76, both hemispheres 87.2
1901 Male, age 80, both hemispheres 85.7
2619 Male, age 74, both hemispheres 81.3
1977 Female, age 85, both hemispheres 80.1
2438 Female, age 94, left hemisphere 76.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.0
Samples: 197

Max nTPM: 174.3
Min nTPM: 38.5
Std nTPM: 19.4
Median nTPM: 88.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 174.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 162.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 158.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 153.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 142.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 132.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 126.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 124.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 124.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 124.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 123.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 264.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 264.8
FF:10169-103B7 60 years, female 273.0
FF:10153-102I9 76 years, female 256.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 28.7
Min nTPM: 18.8
Sample A Female 28.7
Sample B Female 25.3
Sample C Male 26.9
Sample D Male 18.8
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.8
Sample A Female 19.0
Sample B Female 21.9
Sample C Male 22.2
Sample D Male 15.8
Subiculum
nTPM: 28.5
Samples: 4

Max nTPM: 31.4
Min nTPM: 25.7
Sample A Female 30.2
Sample B Female 25.7
Sample C Male 31.4
Sample D Male 26.7
Ventral hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 33.2
Min nTPM: 20.3
Sample A Female 33.2
Sample B Female 29.7
Sample C Male 26.9
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 115.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.5
Samples: 4

Max nTPM: 95.7
Min nTPM: 73.3
Sample A Male 76.9
Sample B Male 73.3
Sample C Female 95.7
Sample D Female 80.0
Hippocampal formation
nTPM: 115.6
Samples: 4

Max nTPM: 120.2
Min nTPM: 110.3
Sample A Male 120.2
Sample B Male 114.7
Sample C Female 117.2
Sample D Female 110.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70439141 Antisense, RP_050614_03_C06, Mouse strain C57BL/6J (56 days, male) 0.2

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