PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:99.6 nTPM
HPA:99.6 nTPM
FANTOM5:146.0 Scaled Tags Per Million
Pig:85.6 nTPM
Mouse:120.2 nTPM
Allen mouse:1.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 99.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 89.5
2090 Male, age 80, both hemispheres 92.6
2188 Female, age 91, both hemispheres 91.8
2301 Female, age 85, both hemispheres 87.0
1984 Male, age 76, both hemispheres 86.5
Area postrema
nTPM: 87.9
2306 Male, age 80, both hemispheres 90.9
2054 Male, age 76, both hemispheres 87.0
2799 Male, age 61, both hemispheres 86.0
Cuneate nuclei
nTPM: 87.4
2131 Male, age 76, both hemispheres 88.3
2376 Male, age 61, both hemispheres 87.5
2381 Male, age 80, both hemispheres 86.5
Dorsal cochlear nucleus
nTPM: 91.1
2370 Male, age 61, both hemispheres 95.3
2187 Female, age 91, both hemispheres 92.2
2378 Male, age 80, both hemispheres 91.5
2802 Male, age 74, right hemisphere 90.5
2058 Male, age 76, both hemispheres 86.3
Dorsal medullary reticular nucleus
nTPM: 90.6
2040 Female, age 85, both hemispheres 99.8
2373 Male, age 61, both hemispheres 88.3
2088 Male, age 76, both hemispheres 83.9
Dorsal motor vagal complex
nTPM: 87.6
2133 Female, age 91, both hemispheres 93.6
2000 Male, age 74, unknown 93.3
2813 Female, age 72, unknown 91.6
2643 Male, age 74, both hemispheres 89.0
2844 Male, age 55, unknown 86.4
2807 Female, age 85, both hemispheres 85.0
2185 Male, age 76, both hemispheres 82.8
2797 Male, age 61, both hemispheres 79.4
Dorsal tegmental nucleus
nTPM: 92.8
2358 Male, age 61, both hemispheres 97.2
2083 Male, age 80, both hemispheres 92.8
2326 Male, age 74, both hemispheres 92.5
1936 Male, age 76, left hemisphere 88.7
Dorsolateral tegmental area
nTPM: 96.8
2337 Male, age 61, both hemispheres 100.4
2360 Male, age 74, both hemispheres 97.6
2654 Male, age 80, both hemispheres 97.4
2751 Female, age 85, both hemispheres 96.7
2141 Male, age 76, both hemispheres 91.7
Gigantocellular reticular nuclei, medullary
nTPM: 92.0
1876 Female, age 85, both hemispheres 100.0
2022 Male, age 76, right hemisphere 94.8
2462 Male, age 74, both hemispheres 93.7
2310 Male, age 80, both hemispheres 88.8
2314 Male, age 61, both hemispheres 88.0
2387 Female, age 91, both hemispheres 86.7
Gigantocellular reticular nuclei, pars
nTPM: 90.0
2168 Male, age 76, both hemispheres 96.8
2084 Female, age 85, both hemispheres 95.3
2336 Male, age 61, both hemispheres 89.6
2706 Male, age 80, both hemispheres 85.3
2330 Male, age 80, both hemispheres 83.1
Inferior olive
nTPM: 92.0
2563 Male, age 74, both hemispheres 96.8
2085 Female, age 85, both hemispheres 93.2
2178 Male, age 61, both hemispheres 92.8
2379 Male, age 80, both hemispheres 89.7
2628 Female, age 91, both hemispheres 87.3
Kolliker-Fuse nucleus
nTPM: 92.4
2315 Male, age 76, right hemisphere 95.9
2163 Male, age 80, both hemispheres 92.4
2793 Female, age 91, left hemisphere 89.1
Lateral lemniscal nuclei
nTPM: 94.7
2169 Male, age 76, both hemispheres 99.9
2746 Female, age 85, left hemisphere 98.9
2036 Male, age 80, both hemispheres 97.4
2453 Male, age 74, right hemisphere 92.1
2320 Female, age 91, left hemisphere 85.0
Lateral medullary reticular nucleus
nTPM: 96.6
2305 Male, age 74, both hemispheres 110.9
2044 Male, age 76, both hemispheres 96.7
2852 Male, age 80, both hemispheres 94.2
2190 Female, age 85, both hemispheres 93.6
2374 Male, age 61, both hemispheres 92.7
2804 Female, age 91, both hemispheres 91.6
Lateral parabrachial nucleus
nTPM: 93.7
2139 Female, age 85, right hemisphere 100.8
2013 Male, age 80, both hemispheres 96.2
2792 Male, age 76, both hemispheres 93.5
2790 Male, age 61, both hemispheres 84.2
Lateral vestibular nucleus
nTPM: 91.3
2311 Male, age 80, both hemispheres 93.2
2184 Male, age 76, both hemispheres 89.5
Locus coeruleus
nTPM: 93.3
2123 Female, age 91, both hemispheres 99.4
2788 Male, age 74, unknown 97.2
2014 Male, age 55, unknown 95.0
2317 Female, age 72, unknown 92.6
1980 Male, age 76, both hemispheres 90.8
2720 Male, age 74, both hemispheres 90.1
2162 Male, age 80, both hemispheres 88.0
Medial olivary nucleus
nTPM: 99.6
1943 Male, age 61, both hemispheres 111.9
2138 Female, age 91, both hemispheres 96.5
1962 Male, age 76, both hemispheres 95.4
2851 Male, age 80, both hemispheres 94.6
Medial parabrachial nucleus
nTPM: 91.3
2854 Male, age 80, both hemispheres 95.4
2170 Female, age 91, both hemispheres 94.7
2786 Male, age 76, both hemispheres 90.8
2463 Female, age 85, right hemisphere 89.5
2156 Male, age 61, both hemispheres 86.2
Medial periolivary nuclei
nTPM: 95.8
2063 Male, age 76, both hemispheres 102.5
2791 Male, age 74, right hemisphere 98.9
2171 Female, age 85, both hemispheres 98.4
2081 Male, age 80, both hemispheres 93.8
2458 Female, age 91, both hemispheres 85.2
Medial vestibular nucleus
nTPM: 95.4
2624 Male, age 61, both hemispheres 100.2
2801 Male, age 74, both hemispheres 96.4
2743 Female, age 85, both hemispheres 96.1
2803 Female, age 91, both hemispheres 95.2
2093 Male, age 80, both hemispheres 92.8
2134 Male, age 76, both hemispheres 91.6
Motor facial nucleus
nTPM: 92.1
2062 Male, age 76, both hemispheres 102.2
2365 Male, age 74, right hemisphere 100.6
2697 Female, age 85, both hemispheres 89.4
2795 Female, age 91, both hemispheres 88.4
2126 Male, age 61, both hemispheres 88.1
2327 Male, age 80, both hemispheres 84.0
Motor hypoglossal nucleus
nTPM: 88.0
2132 Female, age 85, both hemispheres 92.3
2125 Female, age 91, both hemispheres 90.8
2461 Male, age 61, both hemispheres 87.2
2182 Male, age 80, both hemispheres 86.8
2277 Male, age 76, both hemispheres 82.7
Motor trigeminal nucleus
nTPM: 89.7
2335 Male, age 61, both hemispheres 94.4
2309 Male, age 76, both hemispheres 92.3
2079 Male, age 80, both hemispheres 90.2
2560 Male, age 74, both hemispheres 89.8
2321 Female, age 91, both hemispheres 82.1
Nuclei of the trapezoid body
nTPM: 94.2
1983 Male, age 76, both hemispheres 100.9
2159 Male, age 61, both hemispheres 100.1
2735 Female, age 85, both hemispheres 98.5
2166 Male, age 80, both hemispheres 88.1
2368 Female, age 91, both hemispheres 83.4
Nucleus ambiguus
nTPM: 87.5
2071 Male, age 76, both hemispheres 92.3
2096 Female, age 85, both hemispheres 82.8
Nucleus cuneatus
nTPM: 87.7
2564 Male, age 74, both hemispheres 96.4
2380 Male, age 80, both hemispheres 91.7
2808 Female, age 85, both hemispheres 90.3
2100 Male, age 76, both hemispheres 85.3
2562 Male, age 61, both hemispheres 82.7
2805 Female, age 91, both hemispheres 80.2
Nucleus gracilis
nTPM: 92.6
2627 Male, age 74, both hemispheres 103.3
2299 Female, age 85, both hemispheres 88.0
2382 Male, age 80, both hemispheres 86.6
Nucleus raphe magnus
nTPM: 94.9
2160 Male, age 61, both hemispheres 103.6
2051 Male, age 76, both hemispheres 98.6
2172 Female, age 85, both hemispheres 97.1
2455 Male, age 74, both hemispheres 95.8
2328 Male, age 80, both hemispheres 87.7
2459 Female, age 91, both hemispheres 86.7
Nucleus raphe obscurus
nTPM: 91.6
2845 Female, age 85, midline 95.5
2800 Male, age 61, midline 90.8
2142 Male, age 76, midline 88.4
Nucleus raphe pallidus
nTPM: 95.9
1924 Male, age 61, midline 105.2
2183 Male, age 80, midline 93.5
2145 Male, age 76, midline 88.9
Nucleus tractus solitarii
nTPM: 91.8
2144 Female, age 91, right hemisphere 111.4
2191 Female, age 85, both hemispheres 89.2
2656 Male, age 76, both hemispheres 85.8
2307 Male, age 80, both hemispheres 80.6
Paramedian reticular nucleus
nTPM: 97.7
2050 Female, age 85, both hemispheres 100.8
2052 Male, age 76, both hemispheres 98.3
2313 Male, age 61, both hemispheres 97.8
2057 Male, age 80, both hemispheres 94.0
Parvicellular reticular nuclei
nTPM: 93.1
2119 Male, age 80, both hemispheres 96.8
2095 Male, age 76, both hemispheres 94.2
2558 Male, age 74, both hemispheres 88.4
Parvicellular reticular nuclei, medullary
nTPM: 91.9
2189 Female, age 91, both hemispheres 94.1
2091 Female, age 85, both hemispheres 92.8
2181 Male, age 80, left hemisphere 88.7
Peritrigeminal nucleus
nTPM: 96.7
2067 Female, age 85, both hemispheres 98.3
2179 Male, age 61, both hemispheres 97.0
2136 Male, age 76, both hemispheres 94.7
Pontine nuclei
nTPM: 97.7
2727 Male, age 61, right hemisphere 104.1
1863 Male, age 55, unknown 103.6
2787 Female, age 85, both hemispheres 100.6
2109 Female, age 72, unknown 97.3
1968 Male, age 76, left hemisphere 96.8
2115 Male, age 80, left hemisphere 94.9
2454 Male, age 74, left hemisphere 92.8
2319 Female, age 91, both hemispheres 91.2
Pontine raphe nucleus
nTPM: 96.3
2122 Female, age 85, midline 97.2
2853 Male, age 76, midline 95.4
Posteroventral cochlear nucleus
nTPM: 96.4
2341 Male, age 80, both hemispheres 100.5
2752 Female, age 85, both hemispheres 97.1
2371 Male, age 61, both hemispheres 96.6
2135 Female, age 91, both hemispheres 96.5
2070 Male, age 76, both hemispheres 91.2
Prepositus hypoglossal nucleus
nTPM: 93.7
2855 Female, age 85, right hemisphere 94.3
2086 Male, age 80, both hemispheres 93.1
Principal sensory trigeminal nucleus
nTPM: 91.0
2158 Male, age 61, both hemispheres 96.4
2008 Male, age 80, left hemisphere 91.3
2324 Male, age 76, both hemispheres 88.6
2367 Female, age 91, left hemisphere 87.8
Reticular pontine nucleus, caudal
nTPM: 88.6
2092 Male, age 76, both hemispheres 96.2
2457 Female, age 91, both hemispheres 87.8
2559 Male, age 74, both hemispheres 85.4
2332 Male, age 80, right hemisphere 85.0
Reticular pontine nucleus, oral
nTPM: 93.3
2012 Female, age 85, both hemispheres 98.0
1939 Male, age 80, both hemispheres 95.5
2167 Male, age 76, both hemispheres 94.3
2361 Male, age 74, both hemispheres 94.3
2366 Female, age 91, both hemispheres 84.7
Reticulotegmental nucleus
nTPM: 89.8
2325 Male, age 76, both hemispheres 93.1
2333 Male, age 80, both hemispheres 89.4
2452 Male, age 74, both hemispheres 88.5
2322 Female, age 91, both hemispheres 88.4
Spinal trigeminal nucleus, caudal
nTPM: 90.6
2390 Female, age 91, both hemispheres 94.2
2642 Male, age 74, both hemispheres 91.7
2312 Male, age 61, both hemispheres 90.3
2447 Male, age 76, both hemispheres 89.4
2308 Male, age 80, both hemispheres 87.6
Spinal trigeminal nucleus, interpolar
nTPM: 97.0
2625 Male, age 61, both hemispheres 103.2
2066 Male, age 76, right hemisphere 97.7
2033 Male, age 80, both hemispheres 97.1
2386 Female, age 85, both hemispheres 95.6
2389 Female, age 91, both hemispheres 91.2
Spinal trigeminal nucleus, oral
nTPM: 90.2
2737 Female, age 85, both hemispheres 92.5
1978 Male, age 76, both hemispheres 90.4
2164 Male, age 80, both hemispheres 87.8
Spinal vestibular nucleus
nTPM: 94.5
2796 Male, age 61, both hemispheres 104.2
2806 Female, age 85, both hemispheres 97.0
2186 Female, age 91, both hemispheres 94.0
2780 Male, age 80, both hemispheres 94.0
2748 Male, age 76, both hemispheres 92.8
2384 Male, age 74, both hemispheres 85.2
Subcoeruleus area
nTPM: 92.6
2369 Female, age 85, left hemisphere 96.1
1958 Male, age 80, both hemispheres 94.6
2323 Female, age 91, left hemisphere 93.5
2451 Male, age 74, both hemispheres 89.7
2089 Male, age 76, left hemisphere 88.9
Superior olive
nTPM: 93.9
2364 Male, age 74, right hemisphere 103.2
1875 Female, age 85, both hemispheres 99.6
2020 Male, age 76, both hemispheres 96.5
2329 Male, age 80, right hemisphere 85.9
2561 Female, age 91, both hemispheres 84.4
Superior vestibular nucleus
nTPM: 98.7
2383 Male, age 74, both hemispheres 108.5
2015 Male, age 80, both hemispheres 97.0
2061 Male, age 76, both hemispheres 90.4
Ventral medullary reticular nucleus
nTPM: 90.7
2372 Male, age 61, both hemispheres 91.7
2060 Male, age 76, both hemispheres 89.6
Ventral periolivary nuclei
nTPM: 92.6
2023 Male, age 76, both hemispheres 97.9
2130 Female, age 85, both hemispheres 94.9
2165 Male, age 80, both hemispheres 91.4
2794 Female, age 91, left hemisphere 86.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 93.9
2180 Male, age 61, both hemispheres 95.8
1986 Male, age 76, both hemispheres 95.7
2741 Female, age 85, both hemispheres 94.8
2118 Male, age 80, both hemispheres 92.3
2302 Female, age 91, both hemispheres 90.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 93.0
2840 Female, age 85, both hemispheres 98.7
2161 Male, age 80, both hemispheres 94.0
1959 Male, age 76, both hemispheres 93.9
2449 Male, age 74, both hemispheres 93.9
2359 Male, age 61, both hemispheres 93.0
2456 Female, age 91, both hemispheres 84.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 131.0
FF:10182-103D2 60 years, female 142.6
FF:10165-103B3 76 years, female 119.4
Medulla oblongata
Scaled Tags Per Million: 128.5
FF:10174-103C3 60 years, female 129.4
FF:10155-103A2 76 years, female 129.0
FF:10038-101F2 18-64 years, mixed 126.9
Pons
Scaled Tags Per Million: 146.0
FF:10033-101E6 18-54 years, mixed 146.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 85.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 85.7
Samples: 4

Max nTPM: 91.1
Min nTPM: 79.9
Sample A Female 84.7
Sample B Female 79.9
Sample C Male 86.9
Sample D Male 91.1
Pons
nTPM: 84.1
Samples: 4

Max nTPM: 94.3
Min nTPM: 66.6
Sample A Female 92.1
Sample B Female 66.6
Sample C Male 83.2
Sample D Male 94.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 120.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 120.3
Samples: 4

Max nTPM: 124.8
Min nTPM: 115.0
Sample A Male 120.5
Sample B Male 124.8
Sample C Female 115.0
Sample D Female 120.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.3
69817264 Antisense, RP_050510_03_A01, Mouse strain C57BL/6J (56 days, male) 2.3
70919041 Antisense, RP_050712_04_A08, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.7
69817264 Antisense, RP_050510_03_A01, Mouse strain C57BL/6J (56 days, male) 1.2
70919041 Antisense, RP_050712_04_A08, Mouse strain C57BL/6J (56 days, male) 0.1

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