HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:14.0 nTPM
FANTOM5:27.6 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:35.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018041
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 4.4
2148 Female, age 91, left hemisphere 13.9
2621 Female, age 67, right hemisphere 10.4
1855 Male, age 76, left hemisphere 1.4
1898 Male, age 80, left hemisphere 0.8
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 4.7
2531 Female, age 67, both hemispheres 14.5
1927 Female, age 91, both hemispheres 8.3
2530 Female, age 94, left hemisphere 4.1
2528 Male, age 74, both hemispheres 1.5
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.9
2613 Female, age 94, left hemisphere 5.7
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 4.1
2749 Male, age 80, left hemisphere 16.2
1873 Female, age 85, both hemispheres 2.1
2045 Male, age 76, both hemispheres 1.3
2527 Male, age 74, both hemispheres 0.7
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 0.7
1892 Male, age 76, both hemispheres 2.6
2437 Female, age 94, left hemisphere 1.6
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 12.5
2620 Female, age 94, left hemisphere 34.6
2861 Female, age 67, both hemispheres 21.3
2137 Male, age 80, left hemisphere 18.9
1867 Male, age 76, both hemispheres 0.1
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 1.4
2622 Female, age 67, right hemisphere 5.9
2245 Female, age 91, both hemispheres 5.3
2693 Female, age 94, both hemispheres 3.2
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 0.7
2521 Female, age 94, right hemisphere 3.6
1794 Male, age 80, right hemisphere 0.0
1841 Female, age 85, right hemisphere 0.0
1847 Female, age 91, left hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.6
1901 Male, age 80, both hemispheres 2.3
2438 Female, age 94, left hemisphere 0.8
2729 Female, age 91, right hemisphere 0.8
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 38.4
Min nTPM: 1.1
Std nTPM: 8.1
Median nTPM: 12.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 36.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 33.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 32.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 30.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 29.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 29.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 29.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 27.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 27.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.6
FF:10169-103B7 60 years, female 28.2
FF:10153-102I9 76 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 22.7
Min nTPM: 14.6
Sample A Female 21.4
Sample B Female 22.7
Sample C Male 14.6
Sample D Male 19.0
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 29.9
Min nTPM: 20.8
Sample A Female 29.9
Sample B Female 26.1
Sample C Male 20.8
Sample D Male 25.3
Subiculum
nTPM: 14.2
Samples: 4

Max nTPM: 18.5
Min nTPM: 11.5
Sample A Female 18.5
Sample B Female 11.5
Sample C Male 15.2
Sample D Male 11.7
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.4
Sample A Female 19.7
Sample B Female 13.4
Sample C Male 22.1
Sample D Male 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 16.7
Sample A Male 22.5
Sample B Male 17.2
Sample C Female 22.9
Sample D Female 16.7
Hippocampal formation
nTPM: 35.3
Samples: 4

Max nTPM: 45.2
Min nTPM: 24.3
Sample A Male 24.3
Sample B Male 39.3
Sample C Female 45.2
Sample D Female 32.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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