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RPL27
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  • RPL27
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1111.3 nTPM
HPA:1111.3 nTPM
GTEx:1404.2 nTPM
FANTOM5:40.0 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1111.3
Sample id Sample description nTPM
Amygdala
nTPM: 1111.3
2695 Female, age 67, right hemisphere 1130.7
2514 Male, age 75, right hemisphere 1128.3
2517 Female, age 94, left hemisphere 1105.8
2814 Male, age 76, right hemisphere 1096.2
1987 Female, age 91, left hemisphere 1095.8
Basal amygdala
nTPM: 1089.6
2827 Female, age 67, right hemisphere 1110.0
2609 Male, age 75, right hemisphere 1106.8
2110 Male, age 80, left hemisphere 1086.9
2685 Female, age 94, left hemisphere 1085.3
2243 Female, age 91, right hemisphere 1077.0
1955 Male, age 76, both hemispheres 1071.6
Central amygdala
nTPM: 1101.5
2826 Female, age 94, left hemisphere 1150.5
2515 Male, age 75, right hemisphere 1102.3
2239 Male, age 80, left hemisphere 1090.2
2701 Female, age 91, right hemisphere 1083.5
1905 Male, age 76, both hemispheres 1080.9
Corticomedial amygdala
nTPM: 1091.6
2428 Male, age 75, right hemisphere 1096.3
2240 Male, age 76, both hemispheres 1093.7
2429 Female, age 94, left hemisphere 1093.0
2242 Female, age 91, right hemisphere 1089.9
2829 Male, age 80, left hemisphere 1088.6
2535 Female, age 67, right hemisphere 1087.9
Lateral amygdala
nTPM: 1098.8
2516 Male, age 75, right hemisphere 1130.1
2830 Female, age 67, right hemisphere 1120.7
2534 Female, age 94, left hemisphere 1119.6
2256 Male, age 80, left hemisphere 1080.8
1883 Male, age 76, both hemispheres 1072.9
2255 Female, age 91, right hemisphere 1068.6
Stria terminalis, bed nucleus
nTPM: 1082.5
1974 Female, age 91, both hemispheres 1099.5
2201 Male, age 74, unknown 1084.3
2486 Female, age 94, both hemispheres 1063.8

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1404.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1404.2
Samples: 152

Max nTPM: 4757.0
Min nTPM: 735.7
Std nTPM: 586.4
Median nTPM: 1277.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 4757.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 4025.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 3213.7
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 3190.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 2968.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2800.5
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2627.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2614.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 2488.2
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2191.3
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2186.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 2163.3
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 2161.0
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 2154.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 2139.8
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 2126.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1989.2
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1974.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1963.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1943.0
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1882.6
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1826.8
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1810.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1807.3
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1805.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1767.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1765.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1750.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1731.2
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1680.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1607.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1604.2
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1565.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1564.4
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1548.5
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1537.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1511.1
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1508.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1508.4
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1502.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1498.4
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1495.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1487.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1469.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1468.5
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1464.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1457.5
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1450.2
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1444.4
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1430.5
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1421.6
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1421.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1418.8
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1416.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1408.2
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1403.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1400.7
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1391.7
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1383.8
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1383.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1368.5
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1361.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1356.0
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1355.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1326.2
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1326.1
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1325.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1322.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1321.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1320.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1318.7
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1314.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1298.4
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1290.0
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1279.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1278.4
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1276.4
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1273.8
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1263.9
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1260.2
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1255.6
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1254.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1224.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1223.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1215.7
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1207.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1198.2
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1183.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1180.4
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1174.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1174.0
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1173.1
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1167.4
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1164.3
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1157.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1149.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1147.6
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 1143.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1142.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1137.0
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1132.9
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1129.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1126.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 1120.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1114.8
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 1112.4
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 1086.9
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 1084.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1078.6
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1077.1
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1067.3
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1063.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1055.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 1051.8
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1051.5
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1050.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1047.7
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1030.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1029.7
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1014.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 1010.0
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 997.5
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 993.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 990.6
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 982.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 966.1
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 961.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 957.5
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 945.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 937.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 928.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 927.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 926.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 924.9
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 911.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 896.5
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 889.3
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 873.4
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 861.1
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 851.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 841.6
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 840.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 835.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 822.0
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 820.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 802.9
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 802.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 788.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 783.6
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 770.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 755.5
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 735.7
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 40.0
FF:10151-102I7 76 years, female 40.0

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