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RPL27
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1124.4 nTPM
HPA:1124.4 nTPM
GTEx:1042.3 nTPM
FANTOM5:55.5 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1124.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1099.7
1981 Female, age 72, midline 1121.3
2565 Male, age 75, midline 1117.2
2048 Male, age 55, midline 1102.2
2194 Female, age 79, both hemispheres 1087.5
2816 Male, age 47, midline 1070.4
Cervical spinal cord, dorsal horn
nTPM: 1115.1
2069 Male, age 47, both hemispheres 1161.7
2173 Female, age 72, unknown 1132.2
2296 Male, age 66, both hemispheres 1119.0
1877 Male, age 55, unknown 1111.7
2721 Male, age 90, both hemispheres 1085.9
2297 Male, age 75, both hemispheres 1080.1
Cervical spinal cord, ventral horn
nTPM: 1124.4
2098 Female, age 72, unknown 1173.5
2809 Male, age 90, both hemispheres 1155.2
2480 Male, age 75, both hemispheres 1145.4
2068 Male, age 55, unknown 1108.4
2295 Male, age 66, both hemispheres 1107.2
2820 Female, age 79, both hemispheres 1056.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1042.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1042.3
Samples: 159

Max nTPM: 1974.8
Min nTPM: 409.7
Std nTPM: 303.2
Median nTPM: 998.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1974.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1822.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1820.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1788.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1738.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1671.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1668.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1668.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1656.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1615.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1589.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1571.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1555.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1551.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1544.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1542.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1528.2
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1478.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1439.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1415.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1408.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1395.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1371.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1322.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1321.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1321.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1319.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1289.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1284.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1268.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1253.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1245.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1239.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1237.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1237.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1226.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1225.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1221.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1220.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1210.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1205.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1204.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1199.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1195.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1194.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1189.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1176.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1168.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1156.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1154.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1142.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1138.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1138.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1133.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1124.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1115.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1115.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1108.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1107.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1097.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1088.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1084.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1083.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1082.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1079.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1078.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1077.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1075.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1072.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1050.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1049.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1041.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1028.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1027.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1025.5
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1020.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1019.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1003.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 999.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 998.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 993.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 984.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 981.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 974.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 973.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 972.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 963.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 963.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 961.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 956.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 949.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 938.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 933.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 929.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 926.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 926.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 923.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 920.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 920.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 918.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 895.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 888.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 883.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 880.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 877.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 874.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 872.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 869.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 867.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 862.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 861.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 850.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 849.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 843.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 839.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 835.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 819.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 818.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 815.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 814.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 807.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 806.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 806.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 803.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 787.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 781.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 771.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 771.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 767.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 765.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 761.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 758.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 758.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 751.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 745.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 744.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 743.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 741.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 738.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 736.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 720.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 720.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 710.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 709.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 690.8
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 680.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 667.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 665.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 664.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 657.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 648.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 615.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 599.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 591.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 578.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 551.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 529.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 527.3
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 409.7
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 55.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 55.5
FF:10181-103D1 60 years, female 70.2
FF:10159-103A6 76 years, female 40.9

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