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RPL27
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1119.0 nTPM
HPA:1119.0 nTPM
FANTOM5:53.3 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 1119.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1107.7
2188 Female, age 91, both hemispheres 1128.5
2090 Male, age 80, both hemispheres 1118.8
2301 Female, age 85, both hemispheres 1106.7
1984 Male, age 76, both hemispheres 1076.7
Dorsal cochlear nucleus
nTPM: 1083.9
2187 Female, age 91, both hemispheres 1116.8
2802 Male, age 74, right hemisphere 1090.7
2370 Male, age 61, both hemispheres 1080.4
2378 Male, age 80, both hemispheres 1068.9
2058 Male, age 76, both hemispheres 1062.6
Dorsal tegmental nucleus
nTPM: 1116.0
2358 Male, age 61, both hemispheres 1148.9
2083 Male, age 80, both hemispheres 1115.9
2326 Male, age 74, both hemispheres 1111.5
1936 Male, age 76, left hemisphere 1087.6
Dorsolateral tegmental area
nTPM: 1105.4
2337 Male, age 61, both hemispheres 1141.0
2654 Male, age 80, both hemispheres 1115.9
2751 Female, age 85, both hemispheres 1100.3
2141 Male, age 76, both hemispheres 1096.1
2360 Male, age 74, both hemispheres 1073.6
Kolliker-Fuse nucleus
nTPM: 1106.8
2793 Female, age 91, left hemisphere 1120.1
2315 Male, age 76, right hemisphere 1101.4
2163 Male, age 80, both hemispheres 1098.8
Lateral lemniscal nuclei
nTPM: 1088.5
2169 Male, age 76, both hemispheres 1111.1
2320 Female, age 91, left hemisphere 1088.5
2746 Female, age 85, left hemisphere 1084.9
2453 Male, age 74, right hemisphere 1082.5
2036 Male, age 80, both hemispheres 1075.6
Lateral parabrachial nucleus
nTPM: 1105.4
2792 Male, age 76, both hemispheres 1126.9
2139 Female, age 85, right hemisphere 1103.2
2013 Male, age 80, both hemispheres 1101.7
2790 Male, age 61, both hemispheres 1089.8
Lateral vestibular nucleus
nTPM: 1097.1
2311 Male, age 80, both hemispheres 1109.4
2184 Male, age 76, both hemispheres 1084.8
Locus coeruleus
nTPM: 1095.5
2720 Male, age 74, both hemispheres 1118.2
2162 Male, age 80, both hemispheres 1107.4
2123 Female, age 91, both hemispheres 1102.5
2014 Male, age 55, unknown 1090.5
2788 Male, age 74, unknown 1086.7
1980 Male, age 76, both hemispheres 1082.8
2317 Female, age 72, unknown 1080.4
Medial olivary nucleus
nTPM: 1119.0
2851 Male, age 80, both hemispheres 1128.7
1943 Male, age 61, both hemispheres 1128.6
2138 Female, age 91, both hemispheres 1112.3
1962 Male, age 76, both hemispheres 1106.4
Medial parabrachial nucleus
nTPM: 1104.7
2170 Female, age 91, both hemispheres 1135.5
2854 Male, age 80, both hemispheres 1119.7
2156 Male, age 61, both hemispheres 1098.6
2786 Male, age 76, both hemispheres 1093.4
2463 Female, age 85, right hemisphere 1076.4
Medial periolivary nuclei
nTPM: 1085.8
2063 Male, age 76, both hemispheres 1097.6
2458 Female, age 91, both hemispheres 1096.1
2081 Male, age 80, both hemispheres 1086.7
2171 Female, age 85, both hemispheres 1076.4
2791 Male, age 74, right hemisphere 1072.0
Motor facial nucleus
nTPM: 1086.1
2365 Male, age 74, right hemisphere 1103.0
2697 Female, age 85, both hemispheres 1094.8
2795 Female, age 91, both hemispheres 1093.4
2062 Male, age 76, both hemispheres 1088.0
2126 Male, age 61, both hemispheres 1071.5
2327 Male, age 80, both hemispheres 1066.0
Motor trigeminal nucleus
nTPM: 1088.5
2335 Male, age 61, both hemispheres 1100.3
2321 Female, age 91, both hemispheres 1087.9
2309 Male, age 76, both hemispheres 1087.0
2560 Male, age 74, both hemispheres 1085.8
2079 Male, age 80, both hemispheres 1081.6
Nuclei of the trapezoid body
nTPM: 1080.5
1983 Male, age 76, both hemispheres 1122.6
2166 Male, age 80, both hemispheres 1081.9
2159 Male, age 61, both hemispheres 1078.3
2735 Female, age 85, both hemispheres 1061.7
2368 Female, age 91, both hemispheres 1057.8
Paramedian reticular nucleus
nTPM: 1091.7
2052 Male, age 76, both hemispheres 1108.7
2050 Female, age 85, both hemispheres 1091.6
2313 Male, age 61, both hemispheres 1086.4
2057 Male, age 80, both hemispheres 1080.1
Pontine nuclei
nTPM: 1094.6
2319 Female, age 91, both hemispheres 1117.9
1863 Male, age 55, unknown 1112.8
2787 Female, age 85, both hemispheres 1109.2
2454 Male, age 74, left hemisphere 1100.8
1968 Male, age 76, left hemisphere 1099.9
2115 Male, age 80, left hemisphere 1080.8
2109 Female, age 72, unknown 1080.2
2727 Male, age 61, right hemisphere 1055.3
Pontine raphe nucleus
nTPM: 1090.0
2122 Female, age 85, midline 1090.4
2853 Male, age 76, midline 1089.6
Posteroventral cochlear nucleus
nTPM: 1103.5
2341 Male, age 80, both hemispheres 1137.4
2135 Female, age 91, both hemispheres 1122.7
2752 Female, age 85, both hemispheres 1092.6
2070 Male, age 76, both hemispheres 1083.8
2371 Male, age 61, both hemispheres 1081.3
Principal sensory trigeminal nucleus
nTPM: 1083.7
2367 Female, age 91, left hemisphere 1104.7
2324 Male, age 76, both hemispheres 1087.7
2158 Male, age 61, both hemispheres 1077.2
2008 Male, age 80, left hemisphere 1065.3
Reticular pontine nucleus, caudal
nTPM: 1094.9
2092 Male, age 76, both hemispheres 1113.4
2559 Male, age 74, both hemispheres 1098.8
2457 Female, age 91, both hemispheres 1098.0
2332 Male, age 80, right hemisphere 1069.3
Reticular pontine nucleus, oral
nTPM: 1098.5
2366 Female, age 91, both hemispheres 1125.1
2167 Male, age 76, both hemispheres 1111.4
1939 Male, age 80, both hemispheres 1101.0
2361 Male, age 74, both hemispheres 1077.6
2012 Female, age 85, both hemispheres 1077.5
Reticulotegmental nucleus
nTPM: 1093.3
2452 Male, age 74, both hemispheres 1109.8
2322 Female, age 91, both hemispheres 1089.7
2325 Male, age 76, both hemispheres 1088.4
2333 Male, age 80, both hemispheres 1085.1
Spinal trigeminal nucleus, oral
nTPM: 1087.1
1978 Male, age 76, both hemispheres 1092.4
2164 Male, age 80, both hemispheres 1089.5
2737 Female, age 85, both hemispheres 1079.3
Subcoeruleus area
nTPM: 1095.3
2451 Male, age 74, both hemispheres 1104.5
2369 Female, age 85, left hemisphere 1101.5
1958 Male, age 80, both hemispheres 1098.0
2323 Female, age 91, left hemisphere 1098.0
2089 Male, age 76, left hemisphere 1074.7
Superior olive
nTPM: 1085.0
2020 Male, age 76, both hemispheres 1117.7
2561 Female, age 91, both hemispheres 1086.4
2364 Male, age 74, right hemisphere 1075.0
2329 Male, age 80, right hemisphere 1074.3
1875 Female, age 85, both hemispheres 1071.3
Superior vestibular nucleus
nTPM: 1101.2
2383 Male, age 74, both hemispheres 1124.4
2015 Male, age 80, both hemispheres 1102.3
2061 Male, age 76, both hemispheres 1077.0
Ventral periolivary nuclei
nTPM: 1092.5
2023 Male, age 76, both hemispheres 1105.7
2165 Male, age 80, both hemispheres 1099.5
2130 Female, age 85, both hemispheres 1082.3
2794 Female, age 91, left hemisphere 1082.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1089.1
1959 Male, age 76, both hemispheres 1101.1
2840 Female, age 85, both hemispheres 1099.6
2359 Male, age 61, both hemispheres 1096.7
2161 Male, age 80, both hemispheres 1086.9
2449 Male, age 74, both hemispheres 1080.2
2456 Female, age 91, both hemispheres 1070.3

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 53.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 53.3
FF:10165-103B3 76 years, female 53.9
FF:10182-103D2 60 years, female 52.7
Pons
Scaled Tags Per Million: 42.2
FF:10033-101E6 18-54 years, mixed 42.2

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