HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:59.3 nTPM
HPA:59.3 nTPM
GTEx:40.4 nTPM
FANTOM5:17.2 Scaled Tags Per Million
Pig:98.9 nTPM
Mouse:12.6 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.3
Sample id Sample description nTPM
Hippocampus
nTPM: 59.3
2529 Female, age 94, left hemisphere 61.9
1855 Male, age 76, left hemisphere 61.3
2621 Female, age 67, right hemisphere 60.5
1898 Male, age 80, left hemisphere 58.9
1911 Female, age 85, right hemisphere 57.1
2148 Female, age 91, left hemisphere 56.0
Dentate gyrus
nTPM: 58.2
2530 Female, age 94, left hemisphere 65.3
2531 Female, age 67, both hemispheres 59.4
2010 Male, age 76, both hemispheres 58.8
2246 Female, age 85, both hemispheres 56.4
2528 Male, age 74, both hemispheres 56.2
1927 Female, age 91, both hemispheres 53.1
Entorhinal gyrus
nTPM: 53.3
2117 Female, age 91, right hemisphere 55.5
1787 Male, age 76, left hemisphere 54.7
2686 Male, age 75, right hemisphere 54.2
2764 Male, age 80, right hemisphere 52.4
1938 Female, age 85, left hemisphere 51.7
2613 Female, age 94, left hemisphere 51.2
Hippocampus, CA1
nTPM: 56.0
2045 Male, age 76, both hemispheres 60.1
1873 Female, age 85, both hemispheres 56.9
2527 Male, age 74, both hemispheres 55.7
2082 Female, age 91, right hemisphere 54.4
2749 Male, age 80, left hemisphere 52.9
Hippocampus, CA2
nTPM: 55.8
2437 Female, age 94, left hemisphere 59.6
2249 Male, age 74, both hemispheres 57.3
1963 Male, age 80, left hemisphere 56.4
2113 Female, age 91, right hemisphere 54.5
1892 Male, age 76, both hemispheres 53.8
1940 Female, age 85, left hemisphere 53.5
Hippocampus, CA3
nTPM: 58.0
2861 Female, age 67, both hemispheres 66.5
2436 Male, age 74, both hemispheres 59.8
1867 Male, age 76, both hemispheres 56.6
1891 Female, age 85, both hemispheres 55.4
2620 Female, age 94, left hemisphere 55.4
2137 Male, age 80, left hemisphere 54.3
Parahippocampal cortex
nTPM: 54.1
2018 Male, age 76, both hemispheres 58.9
2622 Female, age 67, right hemisphere 55.4
2245 Female, age 91, both hemispheres 55.1
2250 Female, age 67, right hemisphere 54.9
2532 Female, age 72, left hemisphere 54.7
1990 Female, age 91, right hemisphere 53.6
1850 Male, age 80, both hemispheres 53.5
2692 Male, age 74, both hemispheres 52.4
2693 Female, age 94, both hemispheres 51.5
1933 Female, age 85, both hemispheres 50.7
Perirhinal gyrus
nTPM: 52.8
1794 Male, age 80, right hemisphere 53.3
2848 Male, age 76, right hemisphere 53.3
2521 Female, age 94, right hemisphere 53.1
1841 Female, age 85, right hemisphere 52.7
1847 Female, age 91, left hemisphere 51.6
Subiculum
nTPM: 55.5
2042 Male, age 76, both hemispheres 57.0
2619 Male, age 74, both hemispheres 56.9
2438 Female, age 94, left hemisphere 56.2
2729 Female, age 91, right hemisphere 55.9
1901 Male, age 80, both hemispheres 54.5
1977 Female, age 85, both hemispheres 52.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.4
Samples: 197

Max nTPM: 133.4
Min nTPM: 5.6
Std nTPM: 21.5
Median nTPM: 35.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 133.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 113.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 111.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 106.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 100.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 98.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 92.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 90.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 86.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 83.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 83.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.2
FF:10169-103B7 60 years, female 17.7
FF:10153-102I9 76 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.9
Samples: 4

Max nTPM: 112.7
Min nTPM: 62.6
Sample A Female 94.4
Sample B Female 77.8
Sample C Male 112.7
Sample D Male 62.6
Entorhinal cortex
nTPM: 94.7
Samples: 4

Max nTPM: 112.3
Min nTPM: 72.4
Sample A Female 92.2
Sample B Female 101.7
Sample C Male 112.3
Sample D Male 72.4
Subiculum
nTPM: 93.2
Samples: 4

Max nTPM: 107.5
Min nTPM: 75.8
Sample A Female 107.5
Sample B Female 75.8
Sample C Male 89.0
Sample D Male 100.5
Ventral hippocampus
nTPM: 98.9
Samples: 4

Max nTPM: 145.3
Min nTPM: 80.8
Sample A Female 87.7
Sample B Female 81.8
Sample C Male 145.3
Sample D Male 80.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.0
Sample A Male 7.7
Sample B Male 7.0
Sample C Female 9.3
Sample D Female 8.4
Hippocampal formation
nTPM: 12.6
Samples: 4

Max nTPM: 16.6
Min nTPM: 10.4
Sample A Male 10.8
Sample B Male 16.6
Sample C Female 10.4
Sample D Female 12.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
71378504 Antisense, RP_050510_04_A10, Mouse strain C57BL/6J (56 days, male) 5.7

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