HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.9 nTPM
HPA:17.9 nTPM
GTEx:31.0 nTPM
FANTOM5:55.4 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:19.7 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041229
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 16.6
2148 Female, age 91, left hemisphere 18.8
2621 Female, age 67, right hemisphere 18.0
1911 Female, age 85, right hemisphere 16.3
1855 Male, age 76, left hemisphere 15.9
2529 Female, age 94, left hemisphere 15.9
1898 Male, age 80, left hemisphere 14.6
Dentate gyrus
nTPM: 16.1
2531 Female, age 67, both hemispheres 18.2
2530 Female, age 94, left hemisphere 16.9
1927 Female, age 91, both hemispheres 16.0
2010 Male, age 76, both hemispheres 15.5
2528 Male, age 74, both hemispheres 15.4
2246 Female, age 85, both hemispheres 14.7
Entorhinal gyrus
nTPM: 15.5
2686 Male, age 75, right hemisphere 17.8
1787 Male, age 76, left hemisphere 16.0
2613 Female, age 94, left hemisphere 15.6
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 14.5
2117 Female, age 91, right hemisphere 13.6
Hippocampus, CA1
nTPM: 16.8
2749 Male, age 80, left hemisphere 17.6
2082 Female, age 91, right hemisphere 17.3
2527 Male, age 74, both hemispheres 17.3
2045 Male, age 76, both hemispheres 16.9
1873 Female, age 85, both hemispheres 14.8
Hippocampus, CA2
nTPM: 15.1
2437 Female, age 94, left hemisphere 16.4
2113 Female, age 91, right hemisphere 15.9
1963 Male, age 80, left hemisphere 15.2
2249 Male, age 74, both hemispheres 15.1
1892 Male, age 76, both hemispheres 14.5
1940 Female, age 85, left hemisphere 13.6
Hippocampus, CA3
nTPM: 17.9
2861 Female, age 67, both hemispheres 22.2
2137 Male, age 80, left hemisphere 19.5
2620 Female, age 94, left hemisphere 19.0
2436 Male, age 74, both hemispheres 17.1
1891 Female, age 85, both hemispheres 15.0
1867 Male, age 76, both hemispheres 14.6
Parahippocampal cortex
nTPM: 15.2
2622 Female, age 67, right hemisphere 18.5
2692 Male, age 74, both hemispheres 16.3
2245 Female, age 91, both hemispheres 16.2
2250 Female, age 67, right hemisphere 15.3
2532 Female, age 72, left hemisphere 15.0
2693 Female, age 94, both hemispheres 14.9
1933 Female, age 85, both hemispheres 14.4
1990 Female, age 91, right hemisphere 14.3
2018 Male, age 76, both hemispheres 14.2
1850 Male, age 80, both hemispheres 13.2
Perirhinal gyrus
nTPM: 13.7
1841 Female, age 85, right hemisphere 14.3
2848 Male, age 76, right hemisphere 14.2
1847 Female, age 91, left hemisphere 14.1
1794 Male, age 80, right hemisphere 13.7
2521 Female, age 94, right hemisphere 12.1
Subiculum
nTPM: 15.4
2729 Female, age 91, right hemisphere 16.4
2042 Male, age 76, both hemispheres 16.1
1901 Male, age 80, both hemispheres 16.0
2438 Female, age 94, left hemisphere 15.5
2619 Male, age 74, both hemispheres 15.2
1977 Female, age 85, both hemispheres 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.0
Samples: 197

Max nTPM: 81.1
Min nTPM: 15.2
Std nTPM: 10.0
Median nTPM: 30.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 81.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 77.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 68.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 51.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 51.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 50.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 50.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 50.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 49.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 48.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 47.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.4
FF:10169-103B7 60 years, female 61.7
FF:10153-102I9 76 years, female 49.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.2
Min nTPM: 9.5
Sample A Female 14.2
Sample B Female 13.3
Sample C Male 12.0
Sample D Male 9.5
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 15.1
Min nTPM: 11.2
Sample A Female 14.7
Sample B Female 11.2
Sample C Male 15.1
Sample D Male 12.9
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.1
Sample A Female 17.7
Sample B Female 13.2
Sample C Male 14.5
Sample D Male 12.1
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.4
Sample A Female 13.6
Sample B Female 11.4
Sample C Male 18.4
Sample D Male 14.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.8
Sample A Male 19.4
Sample B Male 22.1
Sample C Female 19.5
Sample D Female 13.8
Hippocampal formation
nTPM: 19.8
Samples: 4

Max nTPM: 20.8
Min nTPM: 19.1
Sample A Male 19.7
Sample B Male 20.8
Sample C Female 19.1
Sample D Female 19.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
2527 Antisense, RP_040407_02_E02, Mouse strain C57BL/6J (56 days, male) 6.6
2528 Antisense, RP_040407_02_E02, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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