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PPP1R1B
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  • PPP1R1B
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1459.2 nTPM
FANTOM5:1209.0 Scaled Tags Per Million
Pig:1336.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA048630Antibody HPA061142Antibody CAB004026
Glial cells MediumNot detectedLow
Neuronal cells MediumNot detectedHigh






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1459.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1459.2
Samples: 246

Max nTPM: 3437.0
Min nTPM: 90.9
Std nTPM: 738.7
Median nTPM: 1436.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3437.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3314.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 3235.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 3230.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3176.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 3047.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 2949.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2903.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2794.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2739.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2712.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2708.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2706.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2614.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2563.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2555.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2537.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2513.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2483.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2480.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2476.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2440.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2407.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2402.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2374.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2363.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 2356.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2355.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2345.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2343.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2341.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2327.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2314.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2310.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2301.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2291.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2269.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 2262.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2254.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2254.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2231.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 2231.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2221.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 2217.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2213.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2190.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2188.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 2186.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2174.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 2174.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2143.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2142.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 2120.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2114.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2101.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2095.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 2095.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2083.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 2061.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 2059.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 2042.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 2038.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2033.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2027.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 2019.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 2008.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 2005.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2004.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1983.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1965.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1957.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1924.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1921.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1920.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1912.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1912.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1894.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1891.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1890.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1882.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1850.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1849.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1848.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1847.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1839.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1809.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1792.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1788.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1779.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1778.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1767.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1758.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1751.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1747.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1731.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1727.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1712.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1669.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1655.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1648.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1642.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1639.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1625.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1622.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1620.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1618.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1607.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1604.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1597.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1579.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1576.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1556.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1532.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1529.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1524.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1519.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1517.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1493.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1471.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1469.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1468.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1461.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1447.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1426.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1410.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1407.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1400.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1375.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1360.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1355.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1354.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1349.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1338.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1336.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1326.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1325.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1301.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1282.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1276.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1270.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1241.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1214.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1212.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1204.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1198.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1198.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1183.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1162.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1159.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1158.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1149.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1147.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1135.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1115.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1100.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1098.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1090.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1058.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1049.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1048.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1026.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1017.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1010.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1007.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1006.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1004.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 994.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 985.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 981.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 972.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 961.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 952.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 942.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 932.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 929.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 927.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 891.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 888.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 848.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 840.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 838.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 832.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 791.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 787.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 787.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 786.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 778.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 773.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 763.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 742.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 728.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 727.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 716.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 706.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 703.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 693.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 689.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 684.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 666.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 662.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 649.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 643.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 638.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 624.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 623.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 622.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 603.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 598.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 596.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 577.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 576.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 570.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 568.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 556.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 544.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 533.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 531.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 529.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 514.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 514.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 511.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 507.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 504.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 502.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 498.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 483.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 478.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 477.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 474.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 471.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 458.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 450.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 435.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 430.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 405.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 404.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 400.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 398.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 392.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 370.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 356.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 338.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 325.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 319.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 204.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 90.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1209.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1209.0
FF:10164-103B2 76 years, female 1209.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1336.8
Pig sample Sample description nTPM
Caudate
nTPM: 1336.8
Samples: 4

Max nTPM: 1888.2
Min nTPM: 927.3
Sample A Female 927.3
Sample B Female 1125.6
Sample C Male 1888.2
Sample D Male 1406.1

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