HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.2 nTPM
HPA:22.2 nTPM
GTEx:22.1 nTPM
FANTOM5:94.5 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:59.1 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
1855 Male, age 76, left hemisphere 22.0
2148 Female, age 91, left hemisphere 22.0
1898 Male, age 80, left hemisphere 21.8
1911 Female, age 85, right hemisphere 21.5
2529 Female, age 94, left hemisphere 21.5
2621 Female, age 67, right hemisphere 21.4
Dentate gyrus
nTPM: 22.0
2530 Female, age 94, left hemisphere 22.3
1927 Female, age 91, both hemispheres 22.1
2246 Female, age 85, both hemispheres 22.1
2531 Female, age 67, both hemispheres 22.1
2010 Male, age 76, both hemispheres 21.9
2528 Male, age 74, both hemispheres 21.7
Entorhinal gyrus
nTPM: 22.0
2686 Male, age 75, right hemisphere 22.4
2613 Female, age 94, left hemisphere 22.3
1787 Male, age 76, left hemisphere 22.1
2117 Female, age 91, right hemisphere 22.0
2764 Male, age 80, right hemisphere 22.0
1938 Female, age 85, left hemisphere 21.5
Hippocampus, CA1
nTPM: 22.1
2045 Male, age 76, both hemispheres 22.5
2749 Male, age 80, left hemisphere 22.2
2082 Female, age 91, right hemisphere 22.1
1873 Female, age 85, both hemispheres 21.9
2527 Male, age 74, both hemispheres 21.8
Hippocampus, CA2
nTPM: 22.0
2437 Female, age 94, left hemisphere 22.4
2249 Male, age 74, both hemispheres 22.3
1892 Male, age 76, both hemispheres 22.0
2113 Female, age 91, right hemisphere 22.0
1940 Female, age 85, left hemisphere 21.9
1963 Male, age 80, left hemisphere 21.5
Hippocampus, CA3
nTPM: 21.9
2137 Male, age 80, left hemisphere 22.2
1891 Female, age 85, both hemispheres 22.1
2436 Male, age 74, both hemispheres 22.1
1867 Male, age 76, both hemispheres 22.0
2861 Female, age 67, both hemispheres 21.5
2620 Female, age 94, left hemisphere 21.3
Parahippocampal cortex
nTPM: 22.0
1990 Female, age 91, right hemisphere 22.8
1850 Male, age 80, both hemispheres 22.4
1933 Female, age 85, both hemispheres 22.4
2250 Female, age 67, right hemisphere 22.1
2245 Female, age 91, both hemispheres 21.9
2693 Female, age 94, both hemispheres 21.9
2018 Male, age 76, both hemispheres 21.8
2532 Female, age 72, left hemisphere 21.6
2692 Male, age 74, both hemispheres 21.6
2622 Female, age 67, right hemisphere 21.4
Perirhinal gyrus
nTPM: 22.2
2521 Female, age 94, right hemisphere 22.4
1794 Male, age 80, right hemisphere 22.3
1841 Female, age 85, right hemisphere 22.2
2848 Male, age 76, right hemisphere 22.2
1847 Female, age 91, left hemisphere 21.9
Subiculum
nTPM: 21.9
1901 Male, age 80, both hemispheres 22.4
1977 Female, age 85, both hemispheres 22.2
2729 Female, age 91, right hemisphere 22.0
2438 Female, age 94, left hemisphere 21.8
2619 Male, age 74, both hemispheres 21.7
2042 Male, age 76, both hemispheres 21.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.1
Samples: 197

Max nTPM: 66.8
Min nTPM: 2.1
Std nTPM: 10.9
Median nTPM: 20.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 51.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 47.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 46.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 45.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 45.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 44.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 44.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 42.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 42.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 42.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.5
FF:10169-103B7 60 years, female 132.8
FF:10153-102I9 76 years, female 56.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 31.7
Min nTPM: 20.9
Sample A Female 31.7
Sample B Female 24.9
Sample C Male 27.5
Sample D Male 20.9
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.1
Min nTPM: 17.0
Sample A Female 20.2
Sample B Female 21.1
Sample C Male 19.7
Sample D Male 17.0
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 26.9
Min nTPM: 20.1
Sample A Female 26.9
Sample B Female 20.1
Sample C Male 21.4
Sample D Male 20.6
Ventral hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 24.1
Min nTPM: 18.4
Sample A Female 24.1
Sample B Female 18.4
Sample C Male 21.4
Sample D Male 24.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.2
Samples: 4

Max nTPM: 60.5
Min nTPM: 54.8
Sample A Male 54.8
Sample B Male 60.5
Sample C Female 59.3
Sample D Female 58.0
Hippocampal formation
nTPM: 59.1
Samples: 4

Max nTPM: 65.3
Min nTPM: 55.8
Sample A Male 65.3
Sample B Male 59.0
Sample C Female 56.1
Sample D Female 55.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
74990519 Antisense, RP_060410_01_C01, Mouse strain C57BL/6J (56 days, male) 6.8
64 Antisense, RP_Baylor_103217, Mouse strain C57BL/6J (56 days, male) 0.4

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