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LGALS3
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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:273.5 nTPM
GTEx:273.5 nTPM
FANTOM5:376.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003162Antibody CAB005191
Squamous epithelial cells MediumMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 273.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 273.5
Samples: 156

Max nTPM: 513.8
Min nTPM: 121.1
Std nTPM: 82.1
Median nTPM: 250.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 513.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 509.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 499.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 486.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 484.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 463.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 458.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 444.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 443.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 432.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 421.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 418.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 414.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 411.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 395.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 390.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 387.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 382.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 375.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 375.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 370.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 363.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 362.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 355.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 352.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 349.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 346.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 341.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 340.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 338.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 338.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 333.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 331.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 331.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 330.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 328.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 328.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 326.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 325.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 323.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 314.8
GTEX-1C475-0526-SM-793AC 40-49 years, female 312.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 311.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 310.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 309.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 308.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 306.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 306.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 305.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 298.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 297.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 296.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 295.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 290.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 284.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 283.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 282.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 281.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 276.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 276.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 275.3
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 274.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 274.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 273.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 270.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 269.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 268.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 268.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 267.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 261.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 260.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 260.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 259.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 258.2
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 256.0
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 254.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 251.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 251.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 249.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 248.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 248.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 247.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 247.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 247.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 246.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 246.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 246.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 245.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 245.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 244.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 243.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 242.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 242.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 241.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 239.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 239.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 238.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 235.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 235.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 231.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 231.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 231.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 230.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 229.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 229.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 228.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 227.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 227.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 226.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 222.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 221.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 219.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 219.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 219.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 219.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 218.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 217.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 215.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 215.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 215.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 213.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 213.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 212.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 209.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 207.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 206.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 202.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 202.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 201.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 201.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 199.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 197.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 192.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 191.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 190.7
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 188.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 188.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 186.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 185.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 184.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 181.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 180.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 180.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 178.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 177.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 177.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 173.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 170.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 169.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 168.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 168.0
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 161.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 155.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 154.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 132.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 121.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 376.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 376.8
FF:10204-103F6 68 years, female 376.8

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