HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:243.8 nTPM
HPA:243.8 nTPM
GTEx:172.3 nTPM
FANTOM5:102.5 Scaled Tags Per Million
Pig:42.9 nTPM
Mouse:33.8 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063247Antibody CAB017450
Glial cells Not detectedLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 243.8
Sample id Sample description nTPM
Hippocampus
nTPM: 228.3
2529 Female, age 94, left hemisphere 240.6
1855 Male, age 76, left hemisphere 237.9
1898 Male, age 80, left hemisphere 226.5
2621 Female, age 67, right hemisphere 225.1
1911 Female, age 85, right hemisphere 221.4
2148 Female, age 91, left hemisphere 218.6
Dentate gyrus
nTPM: 229.8
2010 Male, age 76, both hemispheres 259.8
2530 Female, age 94, left hemisphere 232.8
2528 Male, age 74, both hemispheres 223.7
2531 Female, age 67, both hemispheres 222.7
2246 Female, age 85, both hemispheres 221.1
1927 Female, age 91, both hemispheres 218.4
Entorhinal gyrus
nTPM: 223.0
1787 Male, age 76, left hemisphere 231.6
2117 Female, age 91, right hemisphere 226.8
1938 Female, age 85, left hemisphere 225.6
2686 Male, age 75, right hemisphere 223.0
2764 Male, age 80, right hemisphere 219.7
2613 Female, age 94, left hemisphere 211.4
Hippocampus, CA1
nTPM: 243.8
2045 Male, age 76, both hemispheres 293.9
2749 Male, age 80, left hemisphere 250.4
2527 Male, age 74, both hemispheres 227.4
1873 Female, age 85, both hemispheres 226.9
2082 Female, age 91, right hemisphere 220.6
Hippocampus, CA2
nTPM: 232.2
1892 Male, age 76, both hemispheres 275.9
2437 Female, age 94, left hemisphere 228.4
2249 Male, age 74, both hemispheres 225.9
1963 Male, age 80, left hemisphere 222.2
1940 Female, age 85, left hemisphere 222.1
2113 Female, age 91, right hemisphere 218.4
Hippocampus, CA3
nTPM: 239.2
1867 Male, age 76, both hemispheres 288.6
2137 Male, age 80, left hemisphere 245.5
2620 Female, age 94, left hemisphere 229.6
2436 Male, age 74, both hemispheres 227.2
1891 Female, age 85, both hemispheres 223.9
2861 Female, age 67, both hemispheres 220.4
Parahippocampal cortex
nTPM: 230.1
2250 Female, age 67, right hemisphere 261.6
2018 Male, age 76, both hemispheres 260.1
1933 Female, age 85, both hemispheres 229.5
2692 Male, age 74, both hemispheres 228.2
2532 Female, age 72, left hemisphere 224.4
1990 Female, age 91, right hemisphere 222.7
2622 Female, age 67, right hemisphere 221.8
2245 Female, age 91, both hemispheres 220.7
1850 Male, age 80, both hemispheres 218.2
2693 Female, age 94, both hemispheres 213.6
Perirhinal gyrus
nTPM: 224.7
2848 Male, age 76, right hemisphere 238.5
1841 Female, age 85, right hemisphere 230.1
1847 Female, age 91, left hemisphere 224.5
2521 Female, age 94, right hemisphere 217.4
1794 Male, age 80, right hemisphere 212.9
Subiculum
nTPM: 236.4
2042 Male, age 76, both hemispheres 271.0
1901 Male, age 80, both hemispheres 238.9
2619 Male, age 74, both hemispheres 231.3
2438 Female, age 94, left hemisphere 230.0
1977 Female, age 85, both hemispheres 226.1
2729 Female, age 91, right hemisphere 221.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 172.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 172.3
Samples: 197

Max nTPM: 2967.3
Min nTPM: 34.4
Std nTPM: 292.0
Median nTPM: 76.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 2967.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1569.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1251.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 1063.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 996.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 764.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 676.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 660.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 640.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 597.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 595.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.5
FF:10153-102I9 76 years, female 150.6
FF:10169-103B7 60 years, female 54.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.4
Samples: 4

Max nTPM: 50.0
Min nTPM: 37.1
Sample A Female 50.0
Sample B Female 38.4
Sample C Male 40.0
Sample D Male 37.1
Entorhinal cortex
nTPM: 42.9
Samples: 4

Max nTPM: 47.6
Min nTPM: 38.9
Sample A Female 45.1
Sample B Female 47.6
Sample C Male 38.9
Sample D Male 40.1
Subiculum
nTPM: 34.1
Samples: 4

Max nTPM: 40.7
Min nTPM: 27.5
Sample A Female 40.7
Sample B Female 27.5
Sample C Male 31.9
Sample D Male 36.2
Ventral hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 51.7
Min nTPM: 23.2
Sample A Female 31.5
Sample B Female 23.2
Sample C Male 39.8
Sample D Male 51.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 37.1
Min nTPM: 29.8
Sample A Male 31.4
Sample B Male 37.1
Sample C Female 29.8
Sample D Female 36.8
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 29.9
Min nTPM: 27.3
Sample A Male 29.9
Sample B Male 27.3
Sample C Female 27.3
Sample D Female 28.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
71836748 Antisense, RP_051017_02_A03, Mouse strain C57BL/6J (56 days, male) 9.4
68269050 Antisense, RP_041208_01_G01, Mouse strain C57BL/6J (56 days, male) 4.1

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The Human Protein Atlas

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