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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:257.7 nTPM
GTEx:257.7 nTPM
FANTOM5:1595.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA063247Antibody CAB017450
Squamous epithelial cells MediumHigh


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 257.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 257.7
Samples: 156

Max nTPM: 2423.8
Min nTPM: 27.6
Std nTPM: 307.6
Median nTPM: 194.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 2423.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1836.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1329.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1167.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1108.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 889.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 855.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 812.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 732.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 725.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 721.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 587.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 577.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 551.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 522.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 498.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 490.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 481.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 478.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 435.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 417.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 414.8
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 413.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 410.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 384.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 379.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 377.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 369.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 363.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 343.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 326.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 325.8
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 323.0
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 322.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 316.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 305.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 302.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 298.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 288.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 286.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 286.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 279.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 271.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 271.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 270.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 266.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 261.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 249.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 248.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 244.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 243.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 243.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 242.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 240.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 233.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 232.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 227.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 226.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 225.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 216.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 216.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 215.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 215.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 215.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 214.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 214.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 212.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 212.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 212.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 211.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 207.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 204.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 203.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 200.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 200.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 199.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 197.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 195.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 193.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 185.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 183.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 183.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 178.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 173.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 166.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 163.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 161.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 155.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 152.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 151.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 151.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 146.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 144.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 141.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 137.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 133.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 133.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 132.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 132.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 131.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 129.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 128.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 125.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 124.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 123.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 122.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 121.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 119.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 111.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 108.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 107.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 102.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 97.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 93.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 85.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 82.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 80.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 79.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 77.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 77.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 77.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 76.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 75.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 74.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 71.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 64.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 60.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 59.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 56.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 56.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 55.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 54.4
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 49.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 49.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 49.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 48.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 48.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 47.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 47.3
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 47.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 44.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 43.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 43.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 42.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 40.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 40.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 39.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 37.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 35.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 33.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 33.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 33.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 31.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 28.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 28.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 27.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1595.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1595.7
FF:10204-103F6 68 years, female 1595.7

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.