HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.7 nTPM
HPA:14.7 nTPM
GTEx:10.1 nTPM
FANTOM5:28.1 Scaled Tags Per Million
Pig:4.7 nTPM
Mouse:0.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003307Antibody HPA003575
Glial cells Not detectedLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
1911 Female, age 85, right hemisphere 23.7
1855 Male, age 76, left hemisphere 19.3
1898 Male, age 80, left hemisphere 13.5
2148 Female, age 91, left hemisphere 11.8
2529 Female, age 94, left hemisphere 8.6
2621 Female, age 67, right hemisphere 5.3
Dentate gyrus
nTPM: 11.8
1927 Female, age 91, both hemispheres 25.6
2531 Female, age 67, both hemispheres 12.5
2010 Male, age 76, both hemispheres 11.1
2530 Female, age 94, left hemisphere 8.5
2246 Female, age 85, both hemispheres 7.2
2528 Male, age 74, both hemispheres 5.9
Entorhinal gyrus
nTPM: 12.7
1938 Female, age 85, left hemisphere 25.6
2613 Female, age 94, left hemisphere 14.2
1787 Male, age 76, left hemisphere 11.2
2686 Male, age 75, right hemisphere 9.5
2117 Female, age 91, right hemisphere 9.3
2764 Male, age 80, right hemisphere 6.5
Hippocampus, CA1
nTPM: 11.8
1873 Female, age 85, both hemispheres 22.1
2045 Male, age 76, both hemispheres 14.2
2082 Female, age 91, right hemisphere 11.0
2749 Male, age 80, left hemisphere 7.1
2527 Male, age 74, both hemispheres 4.5
Hippocampus, CA2
nTPM: 12.0
1940 Female, age 85, left hemisphere 25.2
2437 Female, age 94, left hemisphere 14.5
1892 Male, age 76, both hemispheres 9.1
2113 Female, age 91, right hemisphere 8.3
2249 Male, age 74, both hemispheres 8.2
1963 Male, age 80, left hemisphere 6.9
Hippocampus, CA3
nTPM: 13.2
2436 Male, age 74, both hemispheres 17.6
1891 Female, age 85, both hemispheres 17.5
2620 Female, age 94, left hemisphere 16.5
1867 Male, age 76, both hemispheres 11.4
2137 Male, age 80, left hemisphere 9.6
2861 Female, age 67, both hemispheres 6.6
Parahippocampal cortex
nTPM: 14.3
1933 Female, age 85, both hemispheres 22.4
1850 Male, age 80, both hemispheres 20.1
2622 Female, age 67, right hemisphere 18.3
2693 Female, age 94, both hemispheres 15.9
2018 Male, age 76, both hemispheres 13.2
2245 Female, age 91, both hemispheres 12.6
2250 Female, age 67, right hemisphere 12.6
2532 Female, age 72, left hemisphere 12.3
1990 Female, age 91, right hemisphere 8.4
2692 Male, age 74, both hemispheres 6.9
Perirhinal gyrus
nTPM: 14.7
1841 Female, age 85, right hemisphere 21.6
1847 Female, age 91, left hemisphere 17.1
2521 Female, age 94, right hemisphere 14.9
1794 Male, age 80, right hemisphere 11.7
2848 Male, age 76, right hemisphere 8.1
Subiculum
nTPM: 13.5
1901 Male, age 80, both hemispheres 21.5
2438 Female, age 94, left hemisphere 20.8
2042 Male, age 76, both hemispheres 14.6
2729 Female, age 91, right hemisphere 11.5
1977 Female, age 85, both hemispheres 6.7
2619 Male, age 74, both hemispheres 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 132.9
Min nTPM: 2.0
Std nTPM: 10.5
Median nTPM: 8.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 132.9
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 40.3
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 38.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 27.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 25.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 24.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 24.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 23.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 23.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 23.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.1
FF:10153-102I9 76 years, female 35.3
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 6.0
Min nTPM: 3.5
Sample A Female 6.0
Sample B Female 3.5
Sample C Male 5.1
Sample D Male 4.1
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 5.8
Min nTPM: 2.5
Sample A Female 5.8
Sample B Female 3.0
Sample C Male 3.9
Sample D Male 2.5
Subiculum
nTPM: 4.3
Samples: 4

Max nTPM: 6.6
Min nTPM: 2.5
Sample A Female 6.6
Sample B Female 2.5
Sample C Male 3.3
Sample D Male 4.6
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.0
Min nTPM: 2.9
Sample A Female 4.9
Sample B Female 2.9
Sample C Male 5.0
Sample D Male 3.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73617660 Antisense, RP_051130_02_C11, Mouse strain C57BL/6J (56 days, male) 0.1

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