HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.5 nTPM
HPA:14.5 nTPM
GTEx:17.4 nTPM
FANTOM5:41.1 Scaled Tags Per Million
Pig:16.9 nTPM
Mouse:31.6 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044346
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.4
1898 Male, age 80, left hemisphere 13.7
2148 Female, age 91, left hemisphere 13.5
2621 Female, age 67, right hemisphere 12.3
1911 Female, age 85, right hemisphere 11.9
2529 Female, age 94, left hemisphere 11.9
1855 Male, age 76, left hemisphere 11.3
Dentate gyrus
nTPM: 12.1
2531 Female, age 67, both hemispheres 13.1
2528 Male, age 74, both hemispheres 12.4
2246 Female, age 85, both hemispheres 12.3
1927 Female, age 91, both hemispheres 12.2
2530 Female, age 94, left hemisphere 12.2
2010 Male, age 76, both hemispheres 10.7
Entorhinal gyrus
nTPM: 13.9
2764 Male, age 80, right hemisphere 17.2
2613 Female, age 94, left hemisphere 16.5
2686 Male, age 75, right hemisphere 13.8
1787 Male, age 76, left hemisphere 13.0
1938 Female, age 85, left hemisphere 11.7
2117 Female, age 91, right hemisphere 11.1
Hippocampus, CA1
nTPM: 13.4
2749 Male, age 80, left hemisphere 18.3
2527 Male, age 74, both hemispheres 16.4
1873 Female, age 85, both hemispheres 11.8
2082 Female, age 91, right hemisphere 11.5
2045 Male, age 76, both hemispheres 9.0
Hippocampus, CA2
nTPM: 12.8
2437 Female, age 94, left hemisphere 15.3
1963 Male, age 80, left hemisphere 14.5
2249 Male, age 74, both hemispheres 12.6
1940 Female, age 85, left hemisphere 11.8
2113 Female, age 91, right hemisphere 11.7
1892 Male, age 76, both hemispheres 10.6
Hippocampus, CA3
nTPM: 14.5
2620 Female, age 94, left hemisphere 19.5
2436 Male, age 74, both hemispheres 19.4
2861 Female, age 67, both hemispheres 14.7
2137 Male, age 80, left hemisphere 14.5
1867 Male, age 76, both hemispheres 9.7
1891 Female, age 85, both hemispheres 9.1
Parahippocampal cortex
nTPM: 12.6
2622 Female, age 67, right hemisphere 15.8
1990 Female, age 91, right hemisphere 13.4
2692 Male, age 74, both hemispheres 13.4
2250 Female, age 67, right hemisphere 12.6
2245 Female, age 91, both hemispheres 12.4
1933 Female, age 85, both hemispheres 12.2
2693 Female, age 94, both hemispheres 12.1
2018 Male, age 76, both hemispheres 12.0
1850 Male, age 80, both hemispheres 11.8
2532 Female, age 72, left hemisphere 10.2
Perirhinal gyrus
nTPM: 11.6
1794 Male, age 80, right hemisphere 13.1
1847 Female, age 91, left hemisphere 12.6
2521 Female, age 94, right hemisphere 12.4
1841 Female, age 85, right hemisphere 9.9
2848 Male, age 76, right hemisphere 9.8
Subiculum
nTPM: 10.8
2619 Male, age 74, both hemispheres 14.2
2729 Female, age 91, right hemisphere 12.3
1977 Female, age 85, both hemispheres 12.2
1901 Male, age 80, both hemispheres 10.4
2438 Female, age 94, left hemisphere 9.3
2042 Male, age 76, both hemispheres 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 35.8
Min nTPM: 7.0
Std nTPM: 4.3
Median nTPM: 17.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 35.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 27.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 26.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 26.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 26.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 26.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 25.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 24.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 24.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 24.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 23.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.1
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 40.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 18.3
Min nTPM: 11.2
Sample A Female 18.3
Sample B Female 15.3
Sample C Male 15.5
Sample D Male 11.2
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.9
Sample A Female 15.7
Sample B Female 14.2
Sample C Male 15.8
Sample D Male 12.9
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 20.3
Min nTPM: 13.1
Sample A Female 20.3
Sample B Female 13.8
Sample C Male 16.8
Sample D Male 13.1
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 22.4
Min nTPM: 12.6
Sample A Female 17.5
Sample B Female 12.6
Sample C Male 22.4
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.4
Samples: 4

Max nTPM: 29.4
Min nTPM: 26.6
Sample A Male 28.7
Sample B Male 26.6
Sample C Female 28.8
Sample D Female 29.4
Hippocampal formation
nTPM: 31.7
Samples: 4

Max nTPM: 32.1
Min nTPM: 30.8
Sample A Male 30.8
Sample B Male 32.1
Sample C Female 31.6
Sample D Female 32.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
71380477 Antisense, RP_050412_01_G10, Mouse strain C57BL/6J (56 days, male) 4.7

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