HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.7 nTPM
HPA:30.7 nTPM
GTEx:37.9 nTPM
FANTOM5:186.2 Scaled Tags Per Million
Pig:51.4 nTPM
Mouse:59.5 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063298
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
1911 Female, age 85, right hemisphere 30.0
2621 Female, age 67, right hemisphere 29.9
1898 Male, age 80, left hemisphere 28.3
2148 Female, age 91, left hemisphere 26.9
1855 Male, age 76, left hemisphere 26.6
2529 Female, age 94, left hemisphere 25.1
Dentate gyrus
nTPM: 27.6
2531 Female, age 67, both hemispheres 30.9
2246 Female, age 85, both hemispheres 30.6
2010 Male, age 76, both hemispheres 28.0
1927 Female, age 91, both hemispheres 27.1
2528 Male, age 74, both hemispheres 26.9
2530 Female, age 94, left hemisphere 22.3
Entorhinal gyrus
nTPM: 28.7
2613 Female, age 94, left hemisphere 31.8
1938 Female, age 85, left hemisphere 31.0
2764 Male, age 80, right hemisphere 28.0
2686 Male, age 75, right hemisphere 27.8
2117 Female, age 91, right hemisphere 27.5
1787 Male, age 76, left hemisphere 25.9
Hippocampus, CA1
nTPM: 29.1
2749 Male, age 80, left hemisphere 31.9
2045 Male, age 76, both hemispheres 30.2
1873 Female, age 85, both hemispheres 28.8
2527 Male, age 74, both hemispheres 27.7
2082 Female, age 91, right hemisphere 26.8
Hippocampus, CA2
nTPM: 26.8
1892 Male, age 76, both hemispheres 29.6
2249 Male, age 74, both hemispheres 27.9
1940 Female, age 85, left hemisphere 27.5
2113 Female, age 91, right hemisphere 27.1
1963 Male, age 80, left hemisphere 25.9
2437 Female, age 94, left hemisphere 23.0
Hippocampus, CA3
nTPM: 29.8
2137 Male, age 80, left hemisphere 33.9
2436 Male, age 74, both hemispheres 31.3
1867 Male, age 76, both hemispheres 30.4
2620 Female, age 94, left hemisphere 29.7
1891 Female, age 85, both hemispheres 27.1
2861 Female, age 67, both hemispheres 26.5
Parahippocampal cortex
nTPM: 30.2
2622 Female, age 67, right hemisphere 32.7
2693 Female, age 94, both hemispheres 32.1
2018 Male, age 76, both hemispheres 31.4
1850 Male, age 80, both hemispheres 31.2
1933 Female, age 85, both hemispheres 30.3
2245 Female, age 91, both hemispheres 29.8
2532 Female, age 72, left hemisphere 29.1
2250 Female, age 67, right hemisphere 28.9
2692 Male, age 74, both hemispheres 28.8
1990 Female, age 91, right hemisphere 27.9
Perirhinal gyrus
nTPM: 30.7
1841 Female, age 85, right hemisphere 33.7
1794 Male, age 80, right hemisphere 30.8
2521 Female, age 94, right hemisphere 30.7
2848 Male, age 76, right hemisphere 30.4
1847 Female, age 91, left hemisphere 27.8
Subiculum
nTPM: 28.8
2438 Female, age 94, left hemisphere 33.3
1901 Male, age 80, both hemispheres 30.3
1977 Female, age 85, both hemispheres 28.4
2042 Male, age 76, both hemispheres 27.6
2619 Male, age 74, both hemispheres 27.3
2729 Female, age 91, right hemisphere 25.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.9
Samples: 197

Max nTPM: 60.3
Min nTPM: 23.7
Std nTPM: 6.6
Median nTPM: 38.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 60.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 56.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 56.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 51.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 51.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 51.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 50.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 50.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 49.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 49.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 49.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 186.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 186.2
FF:10169-103B7 60 years, female 186.2
FF:10153-102I9 76 years, female 186.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 50.5
Min nTPM: 42.3
Sample A Female 50.3
Sample B Female 45.8
Sample C Male 50.5
Sample D Male 42.3
Entorhinal cortex
nTPM: 51.4
Samples: 4

Max nTPM: 58.9
Min nTPM: 46.1
Sample A Female 46.1
Sample B Female 58.9
Sample C Male 50.3
Sample D Male 50.2
Subiculum
nTPM: 49.4
Samples: 4

Max nTPM: 52.4
Min nTPM: 47.0
Sample A Female 52.4
Sample B Female 49.2
Sample C Male 47.0
Sample D Male 48.9
Ventral hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 47.9
Min nTPM: 32.9
Sample A Female 47.4
Sample B Female 47.9
Sample C Male 32.9
Sample D Male 41.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.6
Samples: 4

Max nTPM: 70.8
Min nTPM: 46.7
Sample A Male 46.7
Sample B Male 70.8
Sample C Female 66.0
Sample D Female 46.9
Hippocampal formation
nTPM: 59.5
Samples: 4

Max nTPM: 64.6
Min nTPM: 47.4
Sample A Male 62.6
Sample B Male 64.6
Sample C Female 47.4
Sample D Female 63.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
74277436 Antisense, RP_051130_03_E08, Mouse strain C57BL/6J (56 days, male) 2.6

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