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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:89.8 nTPM
HPA:89.8 nTPM
GTEx:167.1 nTPM
Mouse:434.2 nTPM
Allen mouse:8.5 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max nTPM 89.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 85.9
2226 Male, age 75, left hemisphere 92.5
1961 Female, age 42, unknown 79.3
Dorsomedial nucleus
nTPM: 79.8
1989 Male, age 62, unknown 86.3
2041 Female, age 72, unknown 79.3
2017 Female, age 42, unknown 73.8
Lateral hypothalamic area
nTPM: 89.8
1791 Male, age 80, right hemisphere 96.8
2271 Male, age 75, both hemispheres 92.5
2228 Male, age 66, unknown 87.4
2412 Male, age 62, unknown 82.6
Mamillary body
nTPM: 84.5
1923 Female, age 72, unknown 89.4
2413 Male, age 66, unknown 86.0
1945 Male, age 80, right hemisphere 83.8
1948 Female, age 72, unknown 82.7
1834 Female, age 42, unknown 80.3
Paraventricular nucleus
nTPM: 77.7
2700 Male, age 62, unknown 77.7
Preoptic area
nTPM: 81.2
1907 Male, age 80, right hemisphere 84.3
2414 Female, age 72, unknown 79.8
1861 Female, age 42, unknown 79.7
Supraoptic nucleus
nTPM: 82.9
2835 Female, age 72, unknown 84.8
1894 Female, age 72, unknown 82.0
2043 Male, age 62, unknown 81.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 167.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 167.1
Samples: 202

Max nTPM: 329.1
Min nTPM: 106.0
Std nTPM: 32.3
Median nTPM: 162.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 329.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 271.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 259.4
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 255.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 251.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 248.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 248.2
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 230.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 227.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 226.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 222.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 221.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 220.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 219.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 217.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 209.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 209.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 208.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 207.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 207.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 207.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 206.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 204.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 203.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 203.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 200.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 199.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 198.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 197.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 195.9
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 195.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 195.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 195.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 194.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 193.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 190.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 189.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 189.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 188.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 188.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 188.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 188.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 187.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 187.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 187.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 186.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 186.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 186.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 186.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 185.1
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 184.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 183.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 181.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 181.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 180.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 180.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 180.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 178.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 177.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 177.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 176.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 176.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 176.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 176.5
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 176.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 176.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 176.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 176.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 176.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 175.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 174.8
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 173.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 173.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 173.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 172.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 172.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 171.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 171.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 171.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 170.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 170.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 170.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 169.6
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 169.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 168.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 168.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 167.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 167.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 167.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 166.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 165.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 165.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 165.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 165.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 164.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 164.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 164.3
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 164.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 163.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 162.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 162.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 162.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 161.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 160.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 160.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 160.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 160.3
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 160.2
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 160.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 160.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 160.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 159.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 159.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 159.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 158.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 158.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 158.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 157.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 156.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 156.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 156.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 156.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 155.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 155.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 155.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 154.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 154.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 154.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 154.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 154.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 153.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 153.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 153.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 152.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 152.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 152.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 152.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 152.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 151.5
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 151.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 150.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 150.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 150.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 150.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 148.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 148.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 148.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 148.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 147.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 147.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 145.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 145.3
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 145.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 144.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 143.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 143.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 143.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 143.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 142.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 141.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 141.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 141.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 139.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 139.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 139.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 139.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 139.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 138.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 138.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 137.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 137.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 136.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 136.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 135.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 135.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 135.7
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 135.0
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 135.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 134.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 132.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 132.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 131.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 131.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 130.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 130.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 129.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 129.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 128.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 127.1
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 125.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 124.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 121.8
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 120.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 118.9
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 115.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 115.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 113.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 111.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 110.7
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 109.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 109.5
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 106.0
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 434.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 434.3
Samples: 4

Max nTPM: 480.1
Min nTPM: 413.4
Sample A Male 416.5
Sample B Male 480.1
Sample C Female 427.1
Sample D Female 413.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.5
2183 Antisense, RP_040407_02_C04, Mouse strain C57BL/6J (56 days, male) 8.5
2184 Antisense, RP_040407_02_C04, Mouse strain C57BL/6J (56 days, male) 2.2

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