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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:159.5 nTPM
FANTOM5:966.3 Scaled Tags Per Million
Pig:239.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA010122Antibody HPA071006Antibody CAB001999Antibody CAB002000
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells HighHighMediumNot detected








CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 159.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 159.5
Samples: 246

Max nTPM: 356.3
Min nTPM: 17.9
Std nTPM: 85.5
Median nTPM: 159.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 356.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 351.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 349.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 346.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 337.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 336.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 335.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 328.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 321.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 319.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 318.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 312.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 311.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 306.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 305.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 305.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 302.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 298.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 296.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 292.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 290.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 287.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 286.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 284.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 282.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 280.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 280.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 279.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 274.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 269.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 266.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 264.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 260.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 259.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 259.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 258.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 249.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 248.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 245.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 243.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 241.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 241.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 241.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 240.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 238.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 238.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 236.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 234.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 234.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 234.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 233.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 232.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 232.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 230.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 230.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 230.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 227.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 224.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 222.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 222.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 221.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 221.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 219.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 218.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 217.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 217.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 216.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 216.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 215.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 215.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 214.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 214.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 214.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 213.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 211.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 211.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 209.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 204.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 204.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 203.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 203.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 201.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 201.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 201.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 201.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 197.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 197.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 193.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 190.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 189.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 189.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 189.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 187.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 186.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 185.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 185.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 185.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 184.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 184.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 184.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 182.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 181.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 179.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 178.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 175.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 173.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 172.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 171.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 170.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 170.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 170.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 169.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 168.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 168.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 167.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 167.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 166.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 166.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 165.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 165.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 161.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 160.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 160.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 157.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 156.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 153.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 149.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 147.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 147.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 147.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 147.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 146.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 146.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 144.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 142.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 141.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 140.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 140.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 139.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 139.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 139.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 137.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 136.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 136.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 134.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 134.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 132.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 130.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 129.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 126.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 125.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 123.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 123.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 122.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 121.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 121.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 120.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 120.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 120.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 119.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 116.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 116.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 115.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 114.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 112.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 111.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 110.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 109.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 105.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 103.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 103.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 96.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 93.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 92.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 92.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 92.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 91.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 91.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 91.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 91.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 90.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 89.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 86.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 86.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 81.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 79.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 75.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 74.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 73.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 73.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 73.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 69.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 69.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 67.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 67.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 65.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 64.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 63.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 62.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 59.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 58.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 57.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 57.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 56.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 55.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 53.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 53.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 53.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 52.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 50.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 49.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 48.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 47.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 47.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 45.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 45.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 43.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 42.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 41.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 40.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 36.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 35.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 35.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 35.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 32.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 28.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 28.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 22.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 21.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 17.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 966.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 966.3
FF:10164-103B2 76 years, female 966.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 239.0
Pig sample Sample description nTPM
Caudate
nTPM: 239.0
Samples: 4

Max nTPM: 295.8
Min nTPM: 181.2
Sample A Female 181.2
Sample B Female 252.5
Sample C Male 295.8
Sample D Male 226.5

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