HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		71.016
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:110.3 nTPM
HPA:110.3 nTPM
GTEx:118.6 nTPM
FANTOM5:119.2 Scaled Tags Per Million
Pig:70.2 nTPM
Mouse:91.5 nTPM
Allen mouse:20.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031813Antibody HPA076571
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA076571
Hippocampal formation mean intensity 71.016
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 57.157
Molecular layer of the dentate gyrus 54.039
Granular dentate gyrus 50.396
CA1 - oriens layer 22.840
CA1 - pyramidal layer 46.878
CA1 - radiatum layer 44.281
CA2 - oriens layer 41.238
CA2 - pyramidal layer 63.190
CA2 - radiatum layer 61.397
CA3 - oriens layer 57.433
CA3 - pyramidal layer 61.348
CA3 - radiatum layer 71.016
Stratum lucidum 56.206
Lacunosum moleculare 41.714
Subiculum 28.243

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 110.3
Sample id Sample description nTPM
Hippocampus
nTPM: 106.1
2621 Female, age 67, right hemisphere 121.2
2148 Female, age 91, left hemisphere 119.3
1898 Male, age 80, left hemisphere 114.5
1855 Male, age 76, left hemisphere 102.0
2529 Female, age 94, left hemisphere 90.9
1911 Female, age 85, right hemisphere 89.0
Dentate gyrus
nTPM: 108.5
2530 Female, age 94, left hemisphere 132.1
1927 Female, age 91, both hemispheres 120.0
2531 Female, age 67, both hemispheres 107.0
2010 Male, age 76, both hemispheres 102.0
2246 Female, age 85, both hemispheres 96.2
2528 Male, age 74, both hemispheres 93.9
Entorhinal gyrus
nTPM: 102.6
2613 Female, age 94, left hemisphere 124.9
2686 Male, age 75, right hemisphere 117.3
2764 Male, age 80, right hemisphere 101.1
1787 Male, age 76, left hemisphere 98.8
1938 Female, age 85, left hemisphere 93.8
2117 Female, age 91, right hemisphere 79.7
Hippocampus, CA1
nTPM: 106.8
2749 Male, age 80, left hemisphere 146.1
1873 Female, age 85, both hemispheres 111.0
2527 Male, age 74, both hemispheres 101.4
2045 Male, age 76, both hemispheres 96.1
2082 Female, age 91, right hemisphere 79.5
Hippocampus, CA2
nTPM: 106.6
1963 Male, age 80, left hemisphere 141.1
1892 Male, age 76, both hemispheres 127.0
2437 Female, age 94, left hemisphere 121.2
2249 Male, age 74, both hemispheres 87.5
2113 Female, age 91, right hemisphere 82.2
1940 Female, age 85, left hemisphere 80.4
Hippocampus, CA3
nTPM: 110.3
2861 Female, age 67, both hemispheres 143.9
2620 Female, age 94, left hemisphere 123.4
2137 Male, age 80, left hemisphere 110.8
1867 Male, age 76, both hemispheres 103.2
2436 Male, age 74, both hemispheres 96.2
1891 Female, age 85, both hemispheres 84.6
Parahippocampal cortex
nTPM: 98.0
2622 Female, age 67, right hemisphere 117.4
2692 Male, age 74, both hemispheres 107.8
2245 Female, age 91, both hemispheres 106.3
2693 Female, age 94, both hemispheres 105.2
1933 Female, age 85, both hemispheres 94.6
2250 Female, age 67, right hemisphere 93.6
1990 Female, age 91, right hemisphere 92.4
1850 Male, age 80, both hemispheres 91.2
2532 Female, age 72, left hemisphere 86.7
2018 Male, age 76, both hemispheres 84.5
Perirhinal gyrus
nTPM: 98.2
1847 Female, age 91, left hemisphere 108.2
2521 Female, age 94, right hemisphere 104.8
1794 Male, age 80, right hemisphere 98.7
2848 Male, age 76, right hemisphere 90.2
1841 Female, age 85, right hemisphere 89.2
Subiculum
nTPM: 91.4
2619 Male, age 74, both hemispheres 101.5
2438 Female, age 94, left hemisphere 99.6
1901 Male, age 80, both hemispheres 96.1
1977 Female, age 85, both hemispheres 89.8
2729 Female, age 91, right hemisphere 86.1
2042 Male, age 76, both hemispheres 75.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.6
Samples: 197

Max nTPM: 252.8
Min nTPM: 21.5
Std nTPM: 52.1
Median nTPM: 117.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 252.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 247.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 232.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 231.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 230.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 229.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 225.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 218.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 218.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 216.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 216.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.2
FF:10169-103B7 60 years, female 142.3
FF:10153-102I9 76 years, female 96.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 89.6
Min nTPM: 55.3
Sample A Female 89.6
Sample B Female 75.1
Sample C Male 56.3
Sample D Male 55.3
Entorhinal cortex
nTPM: 65.9
Samples: 4

Max nTPM: 75.5
Min nTPM: 56.7
Sample A Female 68.4
Sample B Female 63.1
Sample C Male 75.5
Sample D Male 56.7
Subiculum
nTPM: 65.6
Samples: 4

Max nTPM: 83.1
Min nTPM: 57.6
Sample A Female 83.1
Sample B Female 57.6
Sample C Male 60.7
Sample D Male 61.1
Ventral hippocampus
nTPM: 70.2
Samples: 4

Max nTPM: 94.6
Min nTPM: 45.2
Sample A Female 75.5
Sample B Female 45.2
Sample C Male 94.6
Sample D Male 65.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.5
Samples: 4

Max nTPM: 100.3
Min nTPM: 84.1
Sample A Male 91.4
Sample B Male 90.1
Sample C Female 84.1
Sample D Female 100.3
Hippocampal formation
nTPM: 83.7
Samples: 4

Max nTPM: 87.3
Min nTPM: 77.1
Sample A Male 77.1
Sample B Male 86.9
Sample C Female 83.5
Sample D Female 87.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.3
583550 Antisense, RP_040831_02_G08, Mouse strain C57BL/6J (56 days, male) 20.3

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